Os05g0267900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0267900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.57 | 0.389 | 7.86 | -0.435 | 0.873 | 0.646 | -0.172 | -0.629 | 0.337 | 15 | 20.2 | 10 | -- | -- |
| 69.44 | 0.388 | 7.85 | -0.283 | 0.838 | 0.668 | -0.533 | -- | 0.355 | 15.1 | 20.7 | 9 | -- | -- |
| 68.6 | 0.389 | 7.86 | -0.436 | 0.876 | 0.641 | -- | -0.683 | 0.337 | 15.1 | 20.2 | 10 | -- | -- |
| 70.4 | 0.391 | 7.85 | -0.293 | 0.843 | 0.656 | -- | -- | 0.354 | 15.1 | 20.72 | 9 | -- | -- |
| 106.83 | 0.481 | 7.87 | -0.462 | -- | 0.894 | -- | -0.418 | 0.27 | -- | 20.8 | 9 | -- | -- |
| 89.71 | 0.444 | 7.82 | -0.136 | 1.01 | -- | -0.388 | -- | 0.491 | 14.8 | -- | -- | -- | -- |
| 90.23 | 0.445 | 7.82 | -0.146 | 1 | -- | -- | -- | 0.489 | 14.7 | -- | -- | -- | -- |
| 107.84 | 0.484 | 7.87 | -0.396 | -- | 0.901 | -- | -- | 0.282 | -- | 20.71 | 9 | -- | -- |
| 72.61 | 0.397 | 7.84 | -- | 0.856 | 0.62 | -- | -- | 0.392 | 15.1 | 20.7 | 9 | -- | -- |
| 148.92 | 0.57 | 7.82 | -0.188 | -- | -- | -- | -- | 0.463 | -- | -- | -- | -- | -- |
| 90.79 | 0.446 | 7.81 | -- | 1.01 | -- | -- | -- | 0.505 | 14.7 | -- | -- | -- | -- |
| 111.59 | 0.492 | 7.85 | -- | -- | 0.859 | -- | -- | 0.331 | -- | 20.75 | 9 | -- | -- |
| 149.86 | 0.571 | 7.82 | -- | -- | -- | -- | -- | 0.484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.85 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 23 |
| 3 | 68.06 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 23 |
| 5 | 68.84 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 6 | 68.96 | temperature | 20 | 10 | < th | dose independent | rect. | 8 | 23 |
| 10 | 69.08 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 12 | 69.11 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 23 |
| 13 | 69.11 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 23 |
| 14 | 69.14 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 23 |
| 15 | 69.14 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 17 | 69.15 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 18 | 69.16 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 19 | 69.18 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 21 | 69.19 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 23 | 69.23 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 23 |
| 28 | 69.39 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 57 | 69.71 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 23 |
| 73 | 69.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 19 |
| 85 | 70.10 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 114 | 70.39 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 23 |
| 147 | 70.79 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 151 | 70.85 | temperature | 20 | 10 | > th | dose independent | rect. | 3 | 23 |
| 155 | 70.89 | temperature | 20 | 270 | < th | dose independent | rect. | 8 | 20 |
| 168 | 71.15 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 171 | 71.26 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 23 |
| 180 | 71.32 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 23 |
| 199 | 71.43 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 23 |
| 224 | 71.61 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 233 | 71.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 241 | 71.75 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 242 | 71.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 243 | 71.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 244 | 71.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 249 | 71.77 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 254 | 71.81 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 257 | 71.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 259 | 71.83 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 271 | 71.87 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 280 | 71.91 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 289 | 71.93 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 19 |
| 294 | 71.95 | temperature | 20 | 10 | < th | dose independent | sin | 7 | NA |
| 295 | 71.95 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 297 | 71.96 | temperature | 20 | 10 | > th | dose independent | sin | 7 | NA |
| 310 | 71.99 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 348 | 72.20 | wind | 9 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 380 | 72.33 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 399 | 72.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 400 | 72.40 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 23 |
| 415 | 72.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 442 | 72.52 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 448 | 72.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 450 | 72.54 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 457 | 72.56 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 487 | 72.64 | wind | 9 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 498 | 72.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 499 | 72.67 | wind | 3 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 542 | 72.76 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 569 | 72.85 | wind | 3 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 658 | 73.02 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 666 | 73.03 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 679 | 73.06 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 691 | 73.09 | wind | 3 | 43200 | < th | dose dependent | sin | 10 | NA |
| 732 | 73.14 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 741 | 73.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 817 | 73.28 | wind | 3 | 43200 | < th | dose independent | sin | 12 | NA |
| 826 | 73.29 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 846 | 73.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 864 | 73.33 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 945 | 73.43 | temperature | 20 | 1440 | < th | dose dependent | sin | 5 | NA |
| 966 | 73.46 | wind | 3 | 43200 | > th | dose independent | sin | 12 | NA |
| 974 | 73.46 | temperature | 20 | 1440 | < th | dose dependent | rect. | 22 | 14 |