Os05g0261700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, plant specific containing protein.
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Os05g0261700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat, plant specific containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.65 | 0.503 | 7.26 | -0.355 | 2.23 | -0.43 | -1.07 | 0.057 | -0.626 | 22.2 | 89.97 | 94 | -- | -- |
| 114.66 | 0.499 | 7.26 | -0.361 | 2.23 | -0.43 | -1.1 | -- | -0.627 | 22.2 | 89.96 | 93 | -- | -- |
| 118.56 | 0.507 | 7.27 | -0.28 | 2.26 | -0.386 | -- | 0.367 | -0.632 | 22.3 | 89.35 | 99 | -- | -- |
| 119.29 | 0.509 | 7.26 | -0.312 | 2.25 | -0.382 | -- | -- | -0.638 | 22.3 | 89.43 | 103 | -- | -- |
| 370.49 | 0.901 | 7.21 | -0.269 | -- | -0.858 | -- | -0.501 | -0.679 | -- | 83.18 | 24 | -- | -- |
| 123.72 | 0.521 | 7.28 | -0.297 | 2.31 | -- | -0.809 | -- | -0.719 | 22.7 | -- | -- | -- | -- |
| 126.45 | 0.527 | 7.28 | -0.264 | 2.31 | -- | -- | -- | -0.717 | 22.7 | -- | -- | -- | -- |
| 361.9 | 0.89 | 7.23 | -0.142 | -- | -0.923 | -- | -- | -0.74 | -- | 78.01 | 29 | -- | -- |
| 121.82 | 0.514 | 7.26 | -- | 2.25 | -0.362 | -- | -- | -0.608 | 22.3 | 89.17 | 103 | -- | -- |
| 456.8 | 0.999 | 7.22 | -0.219 | -- | -- | -- | -- | -0.704 | -- | -- | -- | -- | -- |
| 128.29 | 0.53 | 7.27 | -- | 2.31 | -- | -- | -- | -0.687 | 22.7 | -- | -- | -- | -- |
| 362.43 | 0.89 | 7.22 | -- | -- | -0.926 | -- | -- | -0.724 | -- | 78.01 | 29 | -- | -- |
| 458.06 | 0.999 | 7.21 | -- | -- | -- | -- | -- | -0.68 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.02 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 7 |
| 9 | 109.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 12 | 109.35 | wind | 5.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 17 | 109.51 | wind | 9.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 19 | 109.56 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 24 | 109.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 29 | 109.76 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 34 | 109.78 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 39 | 109.81 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 44 | 109.83 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 56 | 109.88 | wind | 5.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 66 | 109.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 5 |
| 67 | 109.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 72 | 109.96 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 89 | 110.02 | wind | 5.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 261 | 110.42 | wind | 5.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 269 | 110.44 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 308 | 110.54 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 312 | 110.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 317 | 110.56 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 22 |
| 356 | 110.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 20 |
| 369 | 110.69 | wind | 7.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 383 | 110.71 | humidity | 90.0 | 90 | < th | dose independent | rect. | 11 | 16 |
| 472 | 110.86 | wind | 7.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 486 | 110.87 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 2 |
| 499 | 110.90 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 20 | 11 |
| 504 | 110.91 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 552 | 110.98 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 584 | 111.05 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 590 | 111.06 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 594 | 111.07 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 595 | 111.07 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 602 | 111.08 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 663 | 111.17 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 665 | 111.17 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 696 | 111.21 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 21 |
| 710 | 111.23 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 741 | 111.27 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 24 | 7 |
| 787 | 111.35 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 804 | 111.37 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 838 | 111.41 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 839 | 111.41 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 841 | 111.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 910 | 111.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 932 | 111.57 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 935 | 111.57 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 947 | 111.59 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 969 | 111.62 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 989 | 111.65 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 990 | 111.65 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 9 | 1 |