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Os05g0256000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to TGF-beta receptor-interacting protein 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0181) R2 : 0.553
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.08 (0.0455) R2dC : 0.552 R2C : 0.553
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0205 (0.0382) R2dN8 : 0.000364 R2N8 : 0.000826
σ : 0.342
deviance : 53.49
__
_____
C
peak time of C : 15.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.54 0.317 10.9 0.0295 1.03 -0.483 0.266 0.715 0.125 15.6 10.69 1311 -- --
46.59 0.318 10.9 0.0216 1.03 -0.488 0.187 -- 0.117 15.6 10.48 1308 -- --
45.73 0.315 10.9 0.029 1.03 -0.483 -- 0.667 0.125 15.6 10.38 1312 -- --
46.61 0.318 10.9 -0.0171 1.06 -0.487 -- -- 0.115 15.6 10.48 1316 -- --
87.03 0.437 10.9 -0.293 -- 0.551 -- 0.197 -0.0552 -- 10.38 1312 -- --
52.21 0.339 10.9 -0.208 1.07 -- 0.244 -- -0.0445 15.3 -- -- -- --
52.4 0.339 10.9 -0.203 1.08 -- -- -- -0.0431 15.3 -- -- -- --
87.27 0.437 10.9 -0.285 -- 0.553 -- -- -0.055 -- 10.38 1312 -- --
46.54 0.318 10.9 -- 1.03 -0.479 -- -- 0.0994 15.6 10.49 1310 -- --
117.87 0.507 10.9 -0.249 -- -- -- -- -0.0714 -- -- -- -- --
53.49 0.342 10.9 -- 1.08 -- -- -- -0.0205 15.3 -- -- -- --
89.41 0.442 10.9 -- -- 0.549 -- -- -0.0236 -- 10.38 1312 -- --
119.5 0.51 10.9 -- -- -- -- -- -0.0438 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.48 wind 5.0 90 < th dose independent rect. 2 6
3 41.84 wind 5.0 270 < th dose independent rect. 3 2
5 41.89 precipitation 0.1 90 < th dose independent rect. 2 6
6 41.89 precipitation 0.1 90 < th dose dependent rect. 2 6
9 42.03 wind 5.0 270 < th dose independent rect. 23 8
10 42.08 wind 9.0 90 < th dose dependent rect. 2 6
11 42.11 precipitation 0.1 270 < th dose independent rect. 3 2
13 42.11 precipitation 0.1 270 < th dose dependent rect. 3 2
14 42.20 radiation 30.0 270 < th dose dependent rect. 16 10
16 42.21 precipitation 0.1 10 < th dose independent rect. 2 7
17 42.21 precipitation 0.1 10 < th dose dependent rect. 2 7
19 42.23 temperature 10.0 90 > th dose independent rect. 2 6
21 42.23 temperature 30.0 90 < th dose independent rect. 2 6
22 42.23 humidity 50.0 90 > th dose independent rect. 2 6
24 42.23 atmosphere 995.0 90 > th dose independent rect. 2 6
25 42.23 atmosphere 1015.0 90 < th dose independent rect. 2 6
26 42.23 temperature 10.0 90 > th dose independent rect. 8 18
28 42.27 radiation 40.0 90 < th dose independent rect. 13 19
38 42.28 radiation 40.0 90 < th dose independent rect. 2 6
41 42.33 wind 9.0 90 < th dose independent rect. 8 18
46 42.37 wind 5.0 10 < th dose independent rect. 2 7
53 42.42 temperature 10.0 90 > th dose dependent rect. 2 6
54 42.44 precipitation 0.1 270 < th dose independent rect. 2 15
55 42.44 precipitation 0.1 270 < th dose dependent rect. 2 15
62 42.49 precipitation 0.1 270 < th dose independent rect. 13 16
63 42.49 precipitation 0.1 270 < th dose dependent rect. 13 16
64 42.50 temperature 10.0 270 > th dose dependent rect. 8 2
65 42.51 temperature 15.0 10 > th dose independent rect. 15 17
69 42.53 atmosphere 995.0 90 > th dose independent rect. 8 18
73 42.55 temperature 10.0 90 > th dose dependent rect. 8 5
76 42.58 temperature 10.0 270 > th dose independent rect. 3 2
78 42.58 temperature 30.0 270 < th dose independent rect. 3 2
79 42.58 humidity 50.0 270 > th dose independent rect. 3 2
82 42.58 atmosphere 995.0 270 > th dose independent rect. 3 2
83 42.58 atmosphere 1010.0 270 < th dose independent rect. 3 2
85 42.58 radiation 20.0 270 < th dose independent rect. 3 2
89 42.58 temperature 10.0 270 > th dose independent rect. 5 22
90 42.58 precipitation 0.1 270 < th dose independent rect. 10 22
91 42.58 radiation 1.0 270 < th dose dependent rect. 3 2
93 42.58 precipitation 0.1 270 < th dose dependent rect. 10 22
94 42.59 radiation 10.0 270 < th dose independent rect. 16 10
96 42.59 radiation 20.0 270 < th dose dependent rect. 3 2
103 42.61 humidity 50.0 270 > th dose dependent rect. 17 8
104 42.62 radiation 1.0 270 < th dose independent rect. 3 2
110 42.63 temperature 15.0 90 > th dose independent rect. 13 19
112 42.64 wind 1.0 270 > th dose independent rect. 3 1
114 42.65 atmosphere 1000.0 90 > th dose dependent rect. 2 6
124 42.68 wind 9.0 270 < th dose dependent rect. 3 2
127 42.70 humidity 50.0 270 > th dose independent rect. 17 9
132 42.72 precipitation 0.1 90 < th dose independent rect. 8 18
134 42.72 precipitation 0.1 90 < th dose dependent rect. 8 18
136 42.73 radiation 1.0 270 < th dose dependent rect. 5 21
138 42.74 temperature 10.0 10 > th dose independent rect. 2 7
140 42.74 temperature 30.0 10 < th dose independent rect. 2 7
141 42.74 humidity 50.0 10 > th dose independent rect. 2 7
143 42.74 atmosphere 995.0 10 > th dose independent rect. 2 7
144 42.74 atmosphere 1015.0 10 < th dose independent rect. 2 7
145 42.74 temperature 10.0 10 > th dose independent rect. 9 17
162 42.75 wind 9.0 270 < th dose independent rect. 5 22
164 42.75 humidity 50.0 90 > th dose dependent rect. 19 8
167 42.76 temperature 30.0 270 < th dose independent rect. 17 9
168 42.76 precipitation 0.1 10 < th dose independent rect. 15 17
173 42.76 wind 9.0 10 < th dose dependent rect. 2 7
174 42.76 precipitation 0.1 10 < th dose dependent rect. 15 17
180 42.78 temperature 15.0 270 > th dose independent rect. 13 16
186 42.81 wind 7.0 90 < th dose independent rect. 14 18
205 42.86 temperature 10.0 270 > th dose independent rect. 17 9
209 42.86 temperature 10.0 270 > th dose independent rect. 2 15
210 42.86 atmosphere 1015.0 270 < th dose independent rect. 2 15
211 42.86 precipitation 0.1 10 < th dose independent rect. 9 17
215 42.86 precipitation 0.1 10 < th dose dependent rect. 9 17
216 42.87 wind 9.0 10 < th dose independent rect. 9 17
219 42.88 temperature 10.0 10 > th dose dependent rect. 8 7
221 42.89 temperature 10.0 1440 > th dose independent rect. 3 7
224 42.89 atmosphere 995.0 1440 > th dose independent rect. 3 7
225 42.89 temperature 10.0 1440 > th dose independent rect. 10 17
228 42.90 humidity 50.0 270 > th dose independent rect. 5 21
234 42.93 wind 9.0 270 < th dose independent rect. 17 9
238 42.93 radiation 1.0 270 < th dose independent rect. 5 21
257 42.97 humidity 50.0 90 > th dose independent rect. 8 18
259 42.97 wind 9.0 270 < th dose dependent rect. 7 3
262 42.99 wind 7.0 10 < th dose independent rect. 15 17
282 43.02 wind 1.0 30 > th dose independent rect. 8 7
286 43.03 wind 9.0 1440 < th dose independent rect. 3 6
295 43.03 humidity 50.0 1440 > th dose independent rect. 3 6
300 43.03 temperature 10.0 10 > th dose independent rect. 8 7
302 43.03 atmosphere 995.0 10 > th dose independent rect. 8 7
303 43.03 atmosphere 1015.0 10 < th dose independent rect. 8 7
304 43.03 radiation 1.0 10 > th dose independent rect. 8 7
306 43.03 precipitation 0.1 10 < th dose independent rect. 8 7
312 43.03 atmosphere 1000.0 270 > th dose dependent rect. 2 3
313 43.03 temperature 10.0 270 > th dose dependent rect. 6 5
314 43.03 precipitation 0.1 10 < th dose dependent rect. 8 7
316 43.04 radiation 1.0 270 < th dose independent rect. 12 14
317 43.04 atmosphere 995.0 10 > th dose independent rect. 9 17
326 43.05 wind 9.0 270 < th dose independent rect. 2 15
329 43.06 atmosphere 1005.0 90 > th dose independent rect. 2 6
348 43.08 radiation 40.0 90 < th dose independent rect. 3 16
356 43.10 precipitation 0.1 90 < th dose independent rect. 8 6
360 43.10 precipitation 0.1 90 < th dose dependent rect. 8 6
363 43.10 temperature 10.0 10 > th dose dependent rect. 15 17
366 43.11 wind 9.0 270 < th dose independent rect. 5 8
367 43.11 precipitation 0.1 270 < th dose independent rect. 5 8
373 43.11 precipitation 0.1 270 < th dose dependent rect. 5 8
376 43.12 wind 9.0 10 < th dose independent rect. 8 7
377 43.12 temperature 10.0 270 > th dose independent rect. 5 8
378 43.12 atmosphere 995.0 270 > th dose independent rect. 5 8
379 43.12 atmosphere 1015.0 270 < th dose independent rect. 5 8
380 43.12 atmosphere 995.0 270 > th dose independent rect. 17 9
396 43.14 temperature 15.0 90 > th dose independent rect. 8 5
408 43.15 humidity 50.0 270 > th dose independent rect. 5 8
411 43.15 temperature 10.0 10 > th dose dependent rect. 3 5
413 43.15 temperature 10.0 90 > th dose dependent rect. 14 18
431 43.18 radiation 40.0 90 < th dose dependent rect. 3 5
438 43.19 atmosphere 995.0 90 > th dose independent rect. 8 5
439 43.19 atmosphere 1015.0 90 < th dose independent rect. 8 5
477 43.23 temperature 10.0 1440 > th dose independent rect. 9 7
480 43.23 temperature 10.0 1440 > th dose independent rect. 16 17
485 43.24 radiation 1.0 270 > th dose independent rect. 8 2
487 43.24 wind 9.0 90 < th dose independent rect. 8 5
491 43.24 temperature 10.0 90 > th dose independent rect. 19 8
492 43.24 temperature 30.0 90 < th dose independent rect. 19 8
493 43.24 humidity 50.0 90 > th dose independent rect. 19 8
495 43.24 atmosphere 995.0 90 > th dose independent rect. 19 8
496 43.24 radiation 1.0 90 < th dose independent rect. 19 8
505 43.24 radiation 1.0 270 > th dose independent rect. 11 19
509 43.24 radiation 1.0 90 < th dose dependent rect. 19 8
514 43.24 radiation 1.0 270 < th dose dependent rect. 12 14
517 43.25 wind 9.0 90 < th dose independent rect. 19 8
522 43.25 temperature 10.0 270 > th dose dependent rect. 3 2
527 43.26 humidity 50.0 90 > th dose independent rect. 8 6
529 43.26 radiation 40.0 10 < th dose independent rect. 15 17
531 43.27 temperature 15.0 270 > th dose independent rect. 7 3
544 43.28 wind 1.0 270 > th dose independent rect. 13 16
548 43.28 radiation 40.0 10 < th dose independent rect. 12 20
553 43.29 radiation 1.0 90 > th dose independent rect. 8 5
561 43.30 humidity 50.0 270 > th dose independent rect. 6 19
569 43.32 precipitation 0.1 270 < th dose independent rect. 7 3
574 43.32 temperature 15.0 270 > th dose independent rect. 10 21
575 43.32 precipitation 0.1 270 < th dose dependent rect. 7 3
580 43.33 humidity 50.0 270 > th dose independent rect. 7 3
586 43.33 radiation 1.0 270 > th dose independent rect. 10 21
587 43.33 atmosphere 1000.0 10 > th dose dependent rect. 3 5
589 43.34 wind 9.0 270 < th dose independent rect. 7 3
590 43.34 atmosphere 1005.0 270 > th dose independent rect. 2 3
598 43.35 atmosphere 995.0 270 > th dose independent rect. 7 3
599 43.35 atmosphere 1015.0 270 < th dose independent rect. 7 3
610 43.36 wind 9.0 90 < th dose dependent rect. 14 18
617 43.37 precipitation 0.1 270 < th dose independent rect. 23 8
622 43.37 precipitation 0.1 270 < th dose dependent rect. 23 8
636 43.39 atmosphere 1015.0 90 < th dose independent rect. 8 18
664 43.41 temperature 10.0 270 > th dose independent rect. 6 19
674 43.43 precipitation 0.1 270 < th dose independent rect. 11 8
679 43.43 precipitation 0.1 270 < th dose dependent rect. 11 8
684 43.44 radiation 40.0 270 < th dose dependent rect. 1 5
691 43.45 precipitation 0.1 90 < th dose independent rect. 19 8
692 43.45 wind 9.0 270 < th dose independent rect. 6 19
697 43.45 precipitation 0.1 90 < th dose dependent rect. 19 8
713 43.47 humidity 50.0 270 > th dose dependent rect. 3 2
726 43.49 wind 9.0 270 < th dose independent rect. 10 21
739 43.51 wind 1.0 270 > th dose independent rect. 1 5
741 43.51 temperature 15.0 270 > th dose independent rect. 23 8
774 43.54 humidity 50.0 270 > th dose independent rect. 19 16
821 43.60 temperature 10.0 270 > th dose independent rect. 11 8
822 43.60 atmosphere 1015.0 270 < th dose independent rect. 11 8
823 43.60 temperature 10.0 270 > th dose independent rect. 19 16
824 43.60 atmosphere 995.0 270 > th dose independent rect. 19 16
851 43.64 atmosphere 1005.0 10 > th dose independent rect. 3 5
863 43.65 radiation 10.0 270 < th dose independent rect. 23 8
883 43.66 wind 9.0 270 < th dose independent rect. 19 16
899 43.68 atmosphere 995.0 270 > th dose independent rect. 2 15
901 43.68 atmosphere 995.0 270 > th dose independent rect. 5 21
902 43.68 precipitation 0.1 270 < th dose independent rect. 5 21
909 43.68 precipitation 0.1 270 < th dose dependent rect. 5 21
916 43.69 atmosphere 995.0 10 > th dose independent rect. 15 17
920 43.70 wind 1.0 270 > th dose independent rect. 11 8
965 43.75 wind 1.0 270 > th dose independent rect. 8 2
970 43.75 humidity 90.0 10 < th dose independent rect. 8 7
976 43.75 radiation 40.0 90 < th dose dependent rect. 3 16
979 43.76 wind 9.0 270 < th dose independent rect. 11 8
982 43.76 radiation 40.0 270 < th dose dependent rect. 23 8
988 43.77 temperature 30.0 270 < th dose independent rect. 23 8
989 43.77 humidity 50.0 270 > th dose independent rect. 23 8
991 43.77 atmosphere 995.0 270 > th dose independent rect. 23 8
992 43.77 radiation 30.0 270 < th dose independent rect. 23 8
994 43.77 temperature 10.0 270 > th dose independent rect. 7 16