Os05g0250700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L13 family protein.
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Os05g0250700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L13 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.88 | 0.351 | 2.93 | 0.0905 | 0.0381 | 0.356 | -0.13 | 1.25 | 0.00713 | 1.34 | 44.88 | 109 | -- | -- |
| 57.36 | 0.353 | 2.93 | 0.126 | 0.0599 | 0.36 | -0.295 | -- | 0.0109 | 1.01 | 44.71 | 109 | -- | -- |
| 55.94 | 0.348 | 2.93 | 0.0946 | 0.037 | 0.359 | -- | 1.36 | 0.00853 | 1.35 | 44.88 | 108 | -- | -- |
| 57.74 | 0.354 | 2.93 | 0.093 | 0.018 | 0.257 | -- | -- | 0.02 | 1.02 | 47.02 | 88 | -- | -- |
| 56.01 | 0.349 | 2.94 | 0.0958 | -- | 0.337 | -- | 1.36 | 0.00404 | -- | 44.88 | 108 | -- | -- |
| 57.91 | 0.357 | 2.93 | 0.0737 | 0.0338 | -- | 0.339 | -- | 0.0224 | 11.9 | -- | -- | -- | -- |
| 58.41 | 0.358 | 2.92 | 0.0871 | 0.0329 | -- | -- | -- | 0.0238 | 11.3 | -- | -- | -- | -- |
| 57.76 | 0.354 | 2.93 | 0.106 | -- | 0.241 | -- | -- | 0.0169 | -- | 47 | 88 | -- | -- |
| 58.01 | 0.355 | 2.93 | -- | 0.0193 | 0.221 | -- | -- | 0.0162 | 2.04 | 47.02 | 88 | -- | -- |
| 58.48 | 0.357 | 2.93 | 0.0862 | -- | -- | -- | -- | 0.0235 | -- | -- | -- | -- | -- |
| 58.61 | 0.358 | 2.93 | -- | 0.0321 | -- | -- | -- | 0.0141 | 11.1 | -- | -- | -- | -- |
| 58.03 | 0.355 | 2.93 | -- | -- | 0.209 | -- | -- | 0.0116 | -- | 47.03 | 88 | -- | -- |
| 58.67 | 0.358 | 2.93 | -- | -- | -- | -- | -- | 0.0139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.35 | humidity | 50.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 93 | 49.35 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 185 | 52.49 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 186 | 52.49 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 187 | 52.60 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 188 | 52.66 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 196 | 52.85 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 197 | 52.85 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 198 | 52.85 | wind | 5.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 201 | 52.85 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 1 |
| 206 | 52.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 209 | 52.86 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 210 | 52.86 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 212 | 52.86 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 213 | 52.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 216 | 52.86 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 217 | 52.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 221 | 52.86 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 224 | 52.86 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 234 | 52.86 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 235 | 52.86 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 237 | 52.86 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 238 | 52.86 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 240 | 52.86 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 245 | 52.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 265 | 52.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 266 | 52.86 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 267 | 52.86 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 270 | 52.86 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 272 | 52.86 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 274 | 52.86 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 277 | 52.86 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 282 | 52.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 292 | 52.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 297 | 52.87 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 298 | 52.87 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 301 | 52.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 314 | 52.91 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 315 | 52.91 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 318 | 52.91 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 359 | 53.12 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 395 | 54.32 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 411 | 54.94 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 416 | 55.02 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 460 | 55.12 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 9 |
| 466 | 55.18 | radiation | 40.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 476 | 55.21 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 479 | 55.22 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 573 | 55.54 | radiation | 40.0 | 90 | < th | dose independent | rect. | 23 | 22 |
| 585 | 55.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 607 | 55.68 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 9 |
| 624 | 55.70 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 628 | 55.72 | humidity | 60.0 | 90 | < th | dose independent | sin | 7 | NA |
| 670 | 55.76 | radiation | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 676 | 55.79 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 678 | 55.80 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 687 | 55.82 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 722 | 55.84 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 723 | 55.85 | humidity | 60.0 | 90 | > th | dose independent | sin | 6 | NA |
| 730 | 55.85 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 758 | 55.88 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 839 | 55.92 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 19 | 4 |
| 843 | 55.94 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 849 | 55.95 | radiation | 30.0 | 270 | > th | dose independent | sin | 9 | NA |
| 870 | 55.96 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 889 | 55.99 | radiation | 40.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 983 | 56.03 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 14 |
| 984 | 56.03 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 14 |