Os05g0249500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0249500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.43 | 0.371 | 2.86 | -0.0306 | 0.111 | 1.51 | -0.342 | 4.94 | 0.188 | 5.71 | 9.4 | 389 | -- | -- |
| 63.4 | 0.371 | 2.83 | -0.065 | 0.106 | 0.675 | -0.446 | -- | 0.192 | 6.82 | 10.3 | 373 | -- | -- |
| 62.62 | 0.369 | 2.86 | -0.0495 | 0.0999 | 1.32 | -- | 4.29 | 0.182 | 5.23 | 9.8 | 377 | -- | -- |
| 63.52 | 0.371 | 2.84 | -0.0709 | 0.118 | 0.561 | -- | -- | 0.193 | 4.92 | 10.3 | 376 | -- | -- |
| 63.21 | 0.37 | 2.86 | -0.0405 | -- | 1.35 | -- | 4.64 | 0.188 | -- | 9.8 | 377 | -- | -- |
| 64.12 | 0.375 | 2.84 | -0.0908 | 0.104 | -- | -0.285 | -- | 0.181 | 5.23 | -- | -- | -- | -- |
| 64.31 | 0.376 | 2.84 | -0.0913 | 0.103 | -- | -- | -- | 0.183 | 4.66 | -- | -- | -- | -- |
| 64.24 | 0.373 | 2.84 | -0.0665 | -- | 0.489 | -- | -- | 0.195 | -- | 10.32 | 374 | -- | -- |
| 63.64 | 0.372 | 2.84 | -- | 0.118 | 0.585 | -- | -- | 0.201 | 4.98 | 10.33 | 377 | -- | -- |
| 64.87 | 0.376 | 2.84 | -0.0874 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 64.53 | 0.376 | 2.84 | -- | 0.101 | -- | -- | -- | 0.193 | 4.68 | -- | -- | -- | -- |
| 64.36 | 0.374 | 2.84 | -- | -- | 0.514 | -- | -- | 0.203 | -- | 10.3 | 374 | -- | -- |
| 65.07 | 0.377 | 2.84 | -- | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.23 | wind | 7.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 7 | 60.06 | wind | 7.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 10 | 60.32 | wind | 7.0 | 30 | > th | dose dependent | rect. | 12 | 4 |
| 14 | 60.50 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 17 | 60.51 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 23 | 60.56 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 25 | 60.64 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 36 | 60.96 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 44 | 61.19 | wind | 7.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 47 | 61.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 48 | 61.22 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 4 |
| 51 | 61.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 57 | 61.30 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 60 | 61.32 | wind | 7.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 71 | 61.43 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 79 | 61.46 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 84 | 61.48 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 85 | 61.48 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 88 | 61.50 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 93 | 61.51 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 94 | 61.51 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 95 | 61.51 | temperature | 15.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 100 | 61.51 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 103 | 61.51 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 108 | 61.52 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 111 | 61.52 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 115 | 61.52 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 117 | 61.52 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 119 | 61.52 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 124 | 61.52 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 127 | 61.52 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 131 | 61.52 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 136 | 61.52 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 141 | 61.54 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 142 | 61.54 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 146 | 61.57 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 170 | 61.60 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 175 | 61.63 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 213 | 61.68 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 218 | 61.70 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 238 | 61.86 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 4 |
| 249 | 61.90 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 251 | 61.90 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 254 | 61.93 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 255 | 61.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 258 | 61.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 262 | 61.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 271 | 61.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 272 | 61.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 292 | 61.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 295 | 61.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 324 | 61.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 329 | 61.98 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 398 | 62.07 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 418 | 62.12 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 432 | 62.16 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 482 | 62.22 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 494 | 62.23 | wind | 9.0 | 30 | < th | dose independent | sin | 17 | NA |
| 503 | 62.24 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 514 | 62.25 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 524 | 62.27 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 532 | 62.28 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 558 | 62.31 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 586 | 62.31 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 616 | 62.33 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 618 | 62.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 621 | 62.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 625 | 62.33 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 634 | 62.33 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 635 | 62.33 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 636 | 62.33 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 645 | 62.33 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 649 | 62.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 662 | 62.35 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 671 | 62.37 | radiation | 40.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 687 | 62.40 | wind | 1.0 | 30 | > th | dose independent | rect. | 16 | 10 |
| 768 | 62.46 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 778 | 62.47 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 784 | 62.47 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 789 | 62.48 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 795 | 62.48 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 801 | 62.49 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 815 | 62.50 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 817 | 62.50 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 828 | 62.50 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 837 | 62.50 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 7 |
| 846 | 62.51 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 857 | 62.52 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 870 | 62.53 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 1 |
| 880 | 62.53 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 12 |
| 883 | 62.53 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 893 | 62.53 | wind | 3.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 896 | 62.54 | wind | 1.0 | 30 | > th | dose independent | sin | 16 | NA |
| 912 | 62.55 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 916 | 62.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 918 | 62.55 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 919 | 62.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 922 | 62.55 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 923 | 62.55 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 925 | 62.55 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 930 | 62.55 | temperature | 25.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 933 | 62.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 934 | 62.55 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 945 | 62.56 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 965 | 62.56 | wind | 9.0 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 967 | 62.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 970 | 62.56 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 982 | 62.57 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 991 | 62.57 | wind | 3.0 | 10 | < th | dose dependent | rect. | 1 | 8 |
| 992 | 62.57 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 9 |
| 997 | 62.58 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 999 | 62.58 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |