Os05g0249100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0249100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.68 | 0.357 | 2.94 | -0.0948 | 0.0814 | 1.82 | 0.0718 | -4.12 | 0.117 | 11.1 | 10.1 | 62 | -- | -- |
| 57.88 | 0.354 | 2.95 | -0.0765 | 0.0872 | 2.86 | 0.0324 | -- | 0.114 | 11 | 10.1 | 64 | -- | -- |
| 57.7 | 0.354 | 2.94 | -0.0913 | 0.0824 | 1.88 | -- | -3.85 | 0.116 | 10.6 | 10.1 | 61 | -- | -- |
| 57.88 | 0.354 | 2.95 | -0.0755 | 0.0872 | 2.85 | -- | -- | 0.114 | 10.6 | 10.1 | 64 | -- | -- |
| 58.11 | 0.355 | 2.94 | -0.0935 | -- | 1.78 | -- | -4.32 | 0.117 | -- | 10.1 | 61 | -- | -- |
| 70.5 | 0.394 | 2.96 | -0.182 | 0.118 | -- | -0.0964 | -- | 0.0774 | 12.5 | -- | -- | -- | -- |
| 70.54 | 0.393 | 2.96 | -0.185 | 0.118 | -- | -- | -- | 0.0769 | 12.5 | -- | -- | -- | -- |
| 58.35 | 0.356 | 2.95 | -0.0762 | -- | 2.88 | -- | -- | 0.114 | -- | 10.1 | 63 | -- | -- |
| 58.03 | 0.355 | 2.95 | -- | 0.0874 | 2.9 | -- | -- | 0.123 | 10.7 | 10.1 | 63 | -- | -- |
| 71.41 | 0.395 | 2.96 | -0.189 | -- | -- | -- | -- | 0.0749 | -- | -- | -- | -- | -- |
| 71.44 | 0.395 | 2.95 | -- | 0.121 | -- | -- | -- | 0.0975 | 12.6 | -- | -- | -- | -- |
| 58.5 | 0.356 | 2.95 | -- | -- | 2.93 | -- | -- | 0.124 | -- | 10.1 | 61 | -- | -- |
| 72.36 | 0.397 | 2.96 | -- | -- | -- | -- | -- | 0.0959 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.45 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 11 | 55.45 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 25 | 58.43 | wind | 9 | 90 | > th | dose dependent | rect. | 10 | 6 |
| 45 | 59.29 | wind | 9 | 90 | > th | dose independent | rect. | 11 | 5 |
| 221 | 61.25 | wind | 9 | 270 | > th | dose independent | sin | 5 | NA |
| 247 | 61.57 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 253 | 61.68 | wind | 9 | 270 | > th | dose dependent | sin | 4 | NA |
| 264 | 61.80 | wind | 9 | 270 | < th | dose independent | sin | 4 | NA |
| 333 | 62.14 | wind | 9 | 90 | > th | dose dependent | sin | 0 | NA |
| 500 | 62.72 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 22 |
| 750 | 63.32 | wind | 9 | 90 | > th | dose dependent | no | NA | NA |
| 967 | 63.79 | wind | 9 | 90 | > th | dose independent | rect. | 14 | 22 |
| 969 | 63.79 | humidity | 90 | 90 | > th | dose dependent | rect. | 7 | 5 |