Os05g0246600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os05g0246600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.26 | 0.323 | 3.05 | 0.424 | 0.0611 | -0.271 | -0.192 | 1.7 | 0.147 | 22.6 | 25.63 | 6114 | -- | -- |
| 48.4 | 0.324 | 3.11 | -0.0813 | 0.0726 | -0.12 | -0.219 | -- | 0.0348 | 23.2 | 24.15 | 8862 | -- | -- |
| 45.92 | 0.316 | 3.01 | 0.719 | 0.0282 | -0.478 | -- | 3.19 | 0.281 | 23.1 | 29.45 | 7540 | -- | -- |
| 48.38 | 0.324 | 3.1 | -0.079 | 0.0566 | -0.14 | -- | -- | 0.0527 | 0.445 | 27.17 | 7524 | -- | -- |
| 45.87 | 0.315 | 3.01 | 0.781 | -- | -0.495 | -- | 3.44 | 0.27 | -- | 29.92 | 7491 | -- | -- |
| 49.01 | 0.328 | 3.12 | -0.129 | 0.0696 | -- | -0.201 | -- | -0.00198 | 23.7 | -- | -- | -- | -- |
| 49.18 | 0.328 | 3.12 | -0.121 | 0.0718 | -- | -- | -- | -0.0015 | 0.486 | -- | -- | -- | -- |
| 47.8 | 0.322 | 3.11 | -0.1 | -- | -0.141 | -- | -- | 0.0371 | -- | 33.8 | 7432 | -- | -- |
| 48.37 | 0.324 | 3.12 | -- | 0.0505 | -0.17 | -- | -- | 0.0415 | 0.617 | 29.9 | 7575 | -- | -- |
| 49.5 | 0.329 | 3.12 | -0.119 | -- | -- | -- | -- | -0.000298 | -- | -- | -- | -- | -- |
| 49.56 | 0.329 | 3.12 | -- | 0.07 | -- | -- | -- | 0.012 | 0.399 | -- | -- | -- | -- |
| 47.91 | 0.322 | 3.11 | -- | -- | -0.158 | -- | -- | 0.0496 | -- | 33.9 | 7430 | -- | -- |
| 49.87 | 0.33 | 3.12 | -- | -- | -- | -- | -- | 0.0129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.23 | wind | 1.0 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 2 | 45.31 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 3 | 45.31 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 4 | 45.32 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 6 | 45.34 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 7 | 45.34 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 13 | 45.37 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 17 | 45.39 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 45.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 22 | 45.39 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 23 | 45.39 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 45.39 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 45.39 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 45.39 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 45.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 45.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 37 | 45.39 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 42 | 45.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 47 | 45.43 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 49 | 45.45 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 51 | 45.47 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 57 | 45.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 71 | 45.67 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 101 | 45.80 | wind | 1.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 110 | 45.90 | radiation | 40.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 127 | 45.90 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 155 | 46.12 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 182 | 46.15 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 277 | 46.29 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 308 | 46.31 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 341 | 46.36 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 359 | 46.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 391 | 46.46 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 402 | 46.48 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 452 | 46.50 | humidity | 90.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 453 | 46.50 | humidity | 90.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 462 | 46.50 | wind | 1.0 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 463 | 46.50 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 464 | 46.50 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 474 | 46.51 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 511 | 46.55 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 527 | 46.56 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 531 | 46.57 | wind | 1.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 564 | 46.59 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 594 | 46.60 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 595 | 46.60 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 597 | 46.60 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 605 | 46.61 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 606 | 46.61 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 649 | 46.63 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 652 | 46.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 674 | 46.64 | wind | 1.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 680 | 46.65 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 732 | 46.68 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 749 | 46.68 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 12 |
| 780 | 46.69 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 794 | 46.69 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 798 | 46.69 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 833 | 46.71 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 843 | 46.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 11 |
| 861 | 46.72 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 862 | 46.72 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 872 | 46.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 873 | 46.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 894 | 46.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 898 | 46.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 959 | 46.74 | humidity | 90.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 960 | 46.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 971 | 46.74 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 988 | 46.74 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 11 |