Os05g0242000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os05g0242000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.82 | 0.425 | 2.94 | -0.174 | 0.203 | 4.48 | -0.169 | -10.5 | 0.137 | 4.31 | 0.01826 | 280 | -- | -- |
| 90.48 | 0.446 | 2.91 | 0.011 | 0.19 | 0.923 | -0.267 | -- | 0.101 | 4.45 | 0.06214 | 110 | -- | -- |
| 81.89 | 0.421 | 2.94 | -0.173 | 0.203 | 4.5 | -- | -10.5 | 0.138 | 4.47 | 0.0002533 | 279 | -- | -- |
| 84.6 | 0.428 | 2.9 | -0.0682 | 0.207 | 1.47 | -- | -- | 0.123 | 4.75 | 0.3479 | 282 | -- | -- |
| 84.09 | 0.427 | 2.94 | -0.166 | -- | 4.49 | -- | -10.5 | 0.143 | -- | 0.004908 | 280 | -- | -- |
| 91.6 | 0.449 | 2.91 | 0.0259 | 0.198 | -- | -0.245 | -- | 0.0969 | 4.41 | -- | -- | -- | -- |
| 91.75 | 0.449 | 2.91 | 0.0278 | 0.196 | -- | -- | -- | 0.0982 | 4.22 | -- | -- | -- | -- |
| 86.83 | 0.434 | 2.9 | -0.0666 | -- | 1.46 | -- | -- | 0.125 | -- | 0.362 | 282 | -- | -- |
| 84.41 | 0.428 | 2.9 | -- | 0.218 | 1.58 | -- | -- | 0.115 | 4.74 | 1 | 280 | -- | -- |
| 93.83 | 0.453 | 2.91 | 0.0357 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 91.77 | 0.448 | 2.91 | -- | 0.197 | -- | -- | -- | 0.0951 | 4.21 | -- | -- | -- | -- |
| 86.92 | 0.434 | 2.9 | -- | -- | 1.59 | -- | -- | 0.115 | -- | 1 | 280 | -- | -- |
| 93.87 | 0.452 | 2.91 | -- | -- | -- | -- | -- | 0.0995 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.26 | precipitation | 0.1 | 270 | > th | dose independent | sin | 12 | NA |
| 3 | 79.40 | precipitation | 0.1 | 270 | < th | dose independent | sin | 12 | NA |
| 4 | 79.40 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 12 | NA |
| 7 | 79.57 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 10 | NA |
| 9 | 79.96 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 10 |
| 11 | 80.09 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 16 |
| 16 | 80.14 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 12 |
| 23 | 80.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 15 |
| 40 | 80.44 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 88 | 81.44 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 89 | 81.44 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 91 | 81.61 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 19 |
| 103 | 81.76 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 23 |
| 130 | 81.94 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 131 | 81.97 | precipitation | 0.1 | 270 | > th | dose independent | no | NA | NA |
| 132 | 81.97 | precipitation | 0.1 | 270 | < th | dose independent | no | NA | NA |
| 136 | 81.97 | precipitation | 0.1 | 270 | < th | dose dependent | no | NA | NA |
| 141 | 82.00 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 23 |
| 180 | 82.47 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 190 | 82.53 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 249 | 83.00 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 258 | 83.05 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 281 | 83.15 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 317 | 83.36 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 319 | 83.37 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 320 | 83.39 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 326 | 83.43 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 338 | 83.49 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 350 | 83.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 352 | 83.53 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 353 | 83.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 357 | 83.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 359 | 83.53 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 364 | 83.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 365 | 83.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 366 | 83.53 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 371 | 83.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 372 | 83.54 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 373 | 83.56 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 374 | 83.56 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 426 | 83.80 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 439 | 84.20 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 442 | 84.24 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 4 |
| 443 | 84.26 | precipitation | 0.1 | 270 | > th | dose independent | sin | 1 | NA |
| 445 | 84.26 | precipitation | 0.1 | 270 | < th | dose independent | sin | 1 | NA |
| 446 | 84.26 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 1 | NA |
| 454 | 84.31 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 8 |
| 456 | 84.33 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 466 | 84.41 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 475 | 84.45 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 17 |
| 479 | 84.45 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 17 |
| 492 | 84.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 8 |
| 550 | 84.78 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 571 | 84.94 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 21 | 20 |
| 580 | 84.99 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 2 | NA |
| 681 | 85.63 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 16 |
| 683 | 85.63 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 740 | 85.83 | wind | 1.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 781 | 85.90 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 2 |
| 816 | 85.93 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 2 |
| 817 | 85.93 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 7 |
| 847 | 85.96 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 7 | 13 |
| 856 | 85.97 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 4 |
| 862 | 85.97 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 876 | 85.99 | wind | 1.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 881 | 85.99 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 900 | 86.01 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 10 | 10 |
| 906 | 86.02 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 16 | 3 |
| 915 | 86.03 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 6 |
| 922 | 86.04 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 10 | 10 |