Os05g0232700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0232700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.41 | 0.377 | 9.93 | -0.082 | 1.99 | -0.0471 | -0.497 | -3.84 | -0.309 | 19.6 | 30.44 | 1294 | -- | -- |
| 64.63 | 0.374 | 9.84 | 0.628 | 1.97 | -0.436 | -0.591 | -- | -0.205 | 19.6 | 31.91 | 7022 | -- | -- |
| 65.1 | 0.376 | 9.92 | -0.0536 | 1.99 | -0.0585 | -- | -3.73 | -0.307 | 19.6 | 30.3 | 1292 | -- | -- |
| 64.85 | 0.375 | 9.84 | 0.64 | 2 | -0.438 | -- | -- | -0.196 | 19.5 | 32.4 | 7022 | -- | -- |
| 277.15 | 0.775 | 9.9 | -0.403 | -- | 0.233 | -- | -5.8 | -0.287 | -- | 30.05 | 1384 | -- | -- |
| 76.52 | 0.41 | 9.83 | 0.448 | 2.01 | -- | -0.485 | -- | -0.214 | 19.4 | -- | -- | -- | -- |
| 77.16 | 0.411 | 9.83 | 0.459 | 2.01 | -- | -- | -- | -0.215 | 19.4 | -- | -- | -- | -- |
| 263.88 | 0.757 | 9.78 | 0.704 | -- | -0.669 | -- | -- | -0.143 | -- | 34 | 7070 | -- | -- |
| 73.71 | 0.4 | 9.83 | -- | 1.96 | -0.401 | -- | -- | -0.23 | 19.5 | 31.81 | 7039 | -- | -- |
| 291.61 | 0.798 | 9.78 | 0.427 | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
| 82.71 | 0.425 | 9.84 | -- | 2 | -- | -- | -- | -0.266 | 19.4 | -- | -- | -- | -- |
| 272.89 | 0.769 | 9.8 | -- | -- | -0.62 | -- | -- | -0.314 | -- | 34.1 | 7057 | -- | -- |
| 296.43 | 0.804 | 9.79 | -- | -- | -- | -- | -- | -0.295 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.52 | temperature | 20 | 10 | > th | dose dependent | sin | 8 | NA |
| 2 | 60.87 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 18 |
| 8 | 61.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 13 | 61.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 16 | 61.80 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 19 | 61.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 22 | 61.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 30 | 62.07 | temperature | 30 | 10 | < th | dose dependent | sin | 8 | NA |
| 57 | 62.44 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 79 | 62.74 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 102 | 62.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 111 | 62.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 127 | 63.09 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 12 |
| 136 | 63.16 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 144 | 63.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 18 | 17 |
| 161 | 63.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 10 |
| 170 | 63.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 176 | 63.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 183 | 63.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 199 | 63.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 14 |
| 231 | 63.77 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 246 | 63.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 248 | 63.80 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 17 |
| 251 | 63.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 253 | 63.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 254 | 63.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 255 | 63.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 258 | 63.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 263 | 63.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 367 | 64.10 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 444 | 64.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 472 | 64.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 482 | 64.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 495 | 64.58 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 502 | 64.60 | temperature | 30 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 552 | 64.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 582 | 64.73 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 584 | 64.73 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 744 | 64.86 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 772 | 64.94 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 801 | 64.97 | temperature | 20 | 90 | > th | dose independent | sin | 7 | NA |
| 802 | 64.97 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 10 |
| 826 | 65.01 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 8 |
| 918 | 65.09 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 940 | 65.10 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 942 | 65.11 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |