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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0231600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Aquaglyceroporin (Tonoplast intrinsic protein (Tipa)).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.32 (0.048) R2 : 0.171
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.45 (0.453) R2dC : 1.63 R2C : -0.891
β3 : 2.48 (0.406) R2dE : 1.06 R2E : -1.46
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0749 (0.101) R2dN8 : 0.0013 R2N8 : 0.00292
σ : 0.895
deviance : 369.11
__
_____
C
peak time of C : 13.8
E
wheather : radiation
threshold : 0.04021
memory length : 278
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.08
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
362.48 0.895 3.29 0.0849 4.05 3.04 -6.69 -5.64 -0.0281 13.7 0.7354 278 7.03 --
369.88 0.896 3.35 -0.257 3.2 2.3 -0.954 -- -0.0829 13.6 0.009454 250 6.98 --
370.01 0.896 3.28 -0.191 3.43 2.47 -- 0.373 -0.065 13.8 0.1205 242 6.4 --
368.66 0.894 3.32 -0.158 3.41 2.45 -- -- -0.0831 13.8 0.03013 275 7.04 --
414.23 0.953 3.36 -0.262 -- -0.621 -- 0.471 -0.184 -- 61.79 1378 6.61 --
403.18 0.941 3.35 -0.231 0.77 -- -0.732 -- -0.165 13.9 -- -- -- --
405.25 0.943 3.35 -0.254 0.769 -- -- -- -0.17 13.8 -- -- -- --
409.22 0.946 3.36 -0.26 -- -0.701 -- -- -0.176 -- 99.93 1381 5.3 --
369.11 0.895 3.32 -- 3.45 2.48 -- -- -0.0749 13.8 0.04021 278 7.08 --
441.12 0.981 3.36 -0.285 -- -- -- -- -0.187 -- -- -- -- --
406.95 0.944 3.35 -- 0.774 -- -- -- -0.142 13.8 -- -- -- --
408.36 0.941 3.35 -- -- -0.878 -- -- -0.176 -- 210.5 3614 10.5 --
443.26 0.983 3.36 -- -- -- -- -- -0.156 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 358.90 humidity 60.0 270 > th dose independent rect. 9 4
2 360.16 wind 1.0 270 > th dose independent rect. 9 4
4 360.50 humidity 50.0 10 > th dose dependent rect. 12 1
5 360.89 temperature 10.0 270 > th dose independent rect. 9 4
6 360.89 atmosphere 995.0 270 > th dose independent rect. 9 4
7 360.89 atmosphere 1015.0 270 < th dose independent rect. 9 4
8 360.89 temperature 10.0 270 > th dose independent rect. 13 20
9 361.15 precipitation 0.1 270 < th dose independent rect. 9 4
10 361.15 precipitation 0.1 270 < th dose dependent rect. 9 4
12 361.68 wind 9.0 270 < th dose independent rect. 13 20
14 361.99 precipitation 0.1 270 < th dose independent rect. 13 20
15 361.99 precipitation 0.1 270 < th dose dependent rect. 13 20
16 362.22 wind 9.0 270 < th dose independent rect. 9 4
17 362.28 radiation 1.0 270 > th dose independent rect. 14 18
18 362.35 radiation 1.0 270 > th dose independent rect. 13 20
20 362.69 radiation 1.0 270 < th dose dependent sin 13 NA
23 363.03 wind 3.0 90 > th dose independent rect. 11 3
29 363.40 humidity 60.0 10 > th dose independent rect. 12 1
32 363.59 wind 1.0 10 > th dose dependent rect. 12 1
40 363.99 radiation 1.0 270 > th dose independent rect. 9 4
41 364.15 radiation 1.0 270 > th dose independent sin 13 NA
44 364.30 atmosphere 995.0 10 > th dose independent rect. 13 23
47 364.42 radiation 1.0 270 < th dose independent sin 13 NA
51 364.55 wind 1.0 90 > th dose dependent rect. 11 3
52 364.59 temperature 10.0 90 > th dose dependent rect. 14 21
53 364.70 radiation 1.0 270 < th dose dependent rect. 17 11
55 364.78 radiation 20.0 10 > th dose independent rect. 12 2
61 364.85 atmosphere 995.0 10 > th dose dependent rect. 12 1
64 364.94 radiation 10.0 10 > th dose dependent rect. 12 3
66 365.04 atmosphere 995.0 270 > th dose dependent rect. 9 5
71 365.07 temperature 25.0 90 > th dose independent rect. 12 1
88 365.37 atmosphere 1000.0 10 > th dose independent rect. 12 1
89 365.37 temperature 20.0 90 > th dose dependent rect. 12 1
90 365.50 atmosphere 995.0 270 > th dose independent rect. 13 20
104 365.82 wind 9.0 10 < th dose independent rect. 12 1
105 365.82 temperature 10.0 10 > th dose independent rect. 12 1
108 365.82 atmosphere 1015.0 10 < th dose independent rect. 12 1
109 365.82 radiation 1.0 10 > th dose independent rect. 12 1
110 365.82 precipitation 0.1 10 < th dose independent rect. 12 1
111 365.82 temperature 10.0 10 > th dose independent rect. 13 23
112 365.82 precipitation 0.1 10 < th dose dependent rect. 12 1
114 365.93 wind 1.0 10 > th dose independent rect. 12 1
128 366.17 wind 5.0 30 > th dose independent rect. 12 1
130 366.21 temperature 30.0 30 < th dose independent rect. 12 1
136 366.31 radiation 40.0 270 < th dose independent rect. 14 18
148 366.36 temperature 20.0 10 > th dose dependent rect. 12 2
153 366.42 temperature 15.0 270 > th dose independent rect. 4 15
182 366.86 wind 9.0 30 < th dose independent rect. 13 23
186 367.00 temperature 10.0 10 > th dose dependent rect. 15 21
199 367.42 humidity 70.0 270 > th dose independent rect. 18 10
205 367.64 temperature 30.0 270 < th dose independent rect. 18 10
210 367.73 wind 1.0 270 > th dose independent rect. 13 20
216 367.79 radiation 1.0 270 < th dose independent rect. 17 11
217 367.80 wind 1.0 270 > th dose independent rect. 14 18
218 367.80 temperature 10.0 90 > th dose dependent rect. 11 3
235 368.24 temperature 10.0 270 > th dose dependent rect. 9 4
240 368.25 wind 9.0 30 < th dose dependent rect. 12 1
244 368.32 humidity 90.0 90 < th dose dependent rect. 12 1
245 368.32 atmosphere 1015.0 30 < th dose dependent rect. 12 1
253 368.44 radiation 30.0 90 > th dose dependent rect. 12 1
283 368.71 temperature 30.0 10 > th dose independent rect. 12 2
287 368.73 temperature 30.0 10 > th dose independent rect. 12 4
289 368.79 humidity 90.0 30 < th dose independent rect. 12 1
290 368.80 temperature 10.0 1440 > th dose independent rect. 13 1
294 368.80 atmosphere 995.0 1440 > th dose independent rect. 13 1
298 368.80 temperature 10.0 1440 > th dose independent rect. 14 23
302 368.84 temperature 10.0 270 > th dose dependent rect. 14 6
308 368.91 precipitation 0.1 10 < th dose independent rect. 13 23
310 368.91 precipitation 0.1 10 < th dose dependent rect. 13 23
341 369.23 atmosphere 1015.0 90 < th dose dependent rect. 15 6
345 369.25 atmosphere 1015.0 270 < th dose independent rect. 13 20
349 369.37 humidity 50.0 10 > th dose independent rect. 11 4
422 369.81 atmosphere 995.0 270 > th dose independent rect. 18 10
440 369.96 precipitation 0.1 270 < th dose independent rect. 18 10
441 369.96 precipitation 0.1 270 < th dose dependent rect. 18 10
457 370.13 temperature 10.0 270 > th dose independent rect. 23 10
458 370.13 humidity 50.0 270 > th dose independent rect. 23 10
459 370.13 atmosphere 995.0 270 > th dose independent rect. 23 10
460 370.13 temperature 10.0 270 > th dose independent rect. 9 14
462 370.14 wind 9.0 270 < th dose independent rect. 23 10
466 370.17 humidity 60.0 270 > th dose independent rect. 20 17
468 370.20 temperature 10.0 270 > th dose independent rect. 18 10
470 370.20 radiation 20.0 270 < th dose independent rect. 18 10
474 370.20 atmosphere 1015.0 270 < th dose independent rect. 4 14
484 370.24 humidity 50.0 270 > th dose independent rect. 13 20
486 370.26 atmosphere 995.0 270 > th dose independent rect. 9 14
493 370.33 temperature 10.0 10 > th dose dependent rect. 15 7
495 370.34 temperature 25.0 90 > th dose independent rect. 14 21
496 370.35 wind 9.0 270 < th dose independent rect. 18 10
527 370.45 wind 9.0 270 < th dose independent rect. 4 14
528 370.46 precipitation 0.1 270 < th dose independent rect. 9 14
529 370.46 precipitation 0.1 270 < th dose dependent rect. 9 14
537 370.50 temperature 25.0 10 > th dose independent rect. 15 21
563 370.57 precipitation 0.1 270 < th dose independent rect. 4 14
564 370.57 precipitation 0.1 270 < th dose dependent rect. 4 14
582 370.71 temperature 30.0 270 < th dose independent rect. 23 10
619 370.88 temperature 10.0 270 > th dose independent rect. 13 8
621 370.88 temperature 10.0 270 > th dose independent rect. 21 16
622 370.88 atmosphere 995.0 270 > th dose independent rect. 21 16
624 370.90 precipitation 0.1 270 < th dose independent rect. 21 16
627 370.90 precipitation 0.1 270 < th dose dependent rect. 21 16
630 370.91 precipitation 0.1 270 < th dose independent rect. 23 10
631 370.91 precipitation 0.1 270 < th dose dependent rect. 23 10
642 371.03 wind 1.0 270 > th dose dependent rect. 9 4
651 371.14 wind 1.0 270 > th dose independent rect. 9 14
656 371.17 temperature 10.0 270 > th dose independent rect. 14 5
658 371.17 atmosphere 1010.0 270 < th dose independent rect. 14 5
660 371.17 temperature 10.0 270 > th dose independent rect. 19 19
661 371.17 atmosphere 995.0 270 > th dose independent rect. 19 19
672 371.28 precipitation 0.1 270 < th dose independent rect. 19 19
673 371.28 precipitation 0.1 270 < th dose dependent rect. 19 19
676 371.31 wind 1.0 270 > th dose independent rect. 13 8
697 371.40 temperature 30.0 30 < th dose dependent rect. 12 1
701 371.44 humidity 50.0 10 > th dose independent rect. 21 18
705 371.50 wind 1.0 270 > th dose independent rect. 14 5
715 371.57 precipitation 0.1 270 < th dose independent rect. 13 8
717 371.57 precipitation 0.1 270 < th dose dependent rect. 13 8
743 371.66 precipitation 0.1 270 < th dose independent rect. 14 5
745 371.66 precipitation 0.1 270 < th dose dependent rect. 14 5
746 371.67 wind 9.0 270 < th dose independent rect. 14 5
762 371.70 atmosphere 1015.0 270 < th dose independent rect. 13 8
763 371.71 humidity 50.0 270 > th dose dependent rect. 9 4
774 371.81 wind 9.0 270 < th dose independent rect. 13 8
815 371.93 radiation 40.0 270 < th dose independent rect. 13 6
867 372.16 temperature 20.0 10 > th dose independent rect. 15 7
869 372.17 temperature 30.0 270 < th dose independent rect. 9 4
876 372.22 atmosphere 1015.0 270 < th dose independent rect. 23 10
909 372.37 wind 9.0 270 < th dose independent rect. 21 16
912 372.39 wind 9.0 270 < th dose independent rect. 19 19
918 372.44 humidity 50.0 90 > th dose independent rect. 15 20
935 372.54 humidity 50.0 270 > th dose independent rect. 14 18
978 372.70 wind 9.0 270 < th dose independent rect. 9 14
990 372.79 humidity 50.0 90 > th dose dependent rect. 11 4