Os05g0226900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0226900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 305.37 | 0.821 | 3.58 | -1.8 | 0.351 | -0.188 | -0.446 | 4.16 | -0.673 | 2.92 | 93.63 | 515 | -- | -- |
| 323.13 | 0.844 | 3.58 | -1.63 | 0.161 | 0.592 | -1.34 | -- | -0.544 | 23.2 | 93.63 | 515 | -- | -- |
| 305.97 | 0.815 | 3.59 | -1.8 | 0.347 | -0.187 | -- | 4.21 | -0.672 | 2.88 | 93.74 | 519 | -- | -- |
| 326.3 | 0.841 | 3.56 | -1.49 | 0.328 | -0.703 | -- | -- | -0.542 | 3.48 | 95.92 | 323 | -- | -- |
| 312.93 | 0.824 | 3.58 | -1.79 | -- | -0.131 | -- | 4.14 | -0.659 | -- | 93.64 | 530 | -- | -- |
| 328.53 | 0.85 | 3.59 | -1.57 | 0.29 | -- | -1.13 | -- | -0.603 | 0.629 | -- | -- | -- | -- |
| 332.1 | 0.853 | 3.58 | -1.53 | 0.356 | -- | -- | -- | -0.601 | 2.81 | -- | -- | -- | -- |
| 332.59 | 0.853 | 3.57 | -1.57 | -- | 0.63 | -- | -- | -0.534 | -- | 93.64 | 530 | -- | -- |
| 390.55 | 0.92 | 3.55 | -- | 0.338 | -0.724 | -- | -- | -0.463 | 3.48 | 94.91 | 400 | -- | -- |
| 339.42 | 0.861 | 3.58 | -1.52 | -- | -- | -- | -- | -0.592 | -- | -- | -- | -- | -- |
| 394.07 | 0.929 | 3.54 | -- | 0.325 | -- | -- | -- | -0.43 | 2.77 | -- | -- | -- | -- |
| 396.52 | 0.927 | 3.55 | -- | -- | -0.631 | -- | -- | -0.448 | -- | 95.12 | 431 | -- | -- |
| 400.22 | 0.934 | 3.54 | -- | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 304.95 | humidity | 90 | 720 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 305.38 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 7 | 306.09 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 8 | 306.20 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 27 | 307.39 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 28 | 307.41 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 43 | 307.47 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 60 | 308.78 | humidity | 90 | 720 | > th | dose dependent | rect. | 23 | 13 |
| 94 | 309.00 | humidity | 90 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 110 | 309.25 | humidity | 90 | 720 | > th | dose dependent | sin | 7 | NA |
| 115 | 309.38 | humidity | 90 | 720 | > th | dose independent | rect. | 2 | 1 |
| 118 | 309.40 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 124 | 309.60 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 1 |
| 141 | 309.92 | humidity | 90 | 720 | > th | dose independent | rect. | 1 | 3 |
| 142 | 309.92 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 144 | 309.95 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 186 | 310.60 | humidity | 50 | 720 | > th | dose dependent | rect. | 22 | 9 |
| 201 | 310.65 | wind | 3 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 206 | 310.78 | humidity | 90 | 720 | > th | dose independent | rect. | 1 | 6 |
| 210 | 310.83 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 235 | 311.16 | humidity | 90 | 10 | > th | dose independent | rect. | 4 | 8 |
| 252 | 311.31 | humidity | 50 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 271 | 311.40 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 22 | 8 |
| 278 | 311.47 | humidity | 90 | 720 | > th | dose independent | rect. | 22 | 14 |
| 291 | 311.54 | humidity | 90 | 720 | < th | dose independent | rect. | 24 | 13 |
| 292 | 311.54 | humidity | 80 | 270 | > th | dose dependent | rect. | 5 | 4 |
| 317 | 311.71 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 21 | 1 |
| 333 | 311.80 | humidity | 90 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 336 | 311.82 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 8 |
| 337 | 311.82 | humidity | 90 | 720 | < th | dose independent | rect. | 24 | 15 |
| 408 | 312.08 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 456 | 312.29 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 22 | 1 |
| 466 | 312.32 | humidity | 90 | 720 | > th | dose independent | sin | 7 | NA |
| 494 | 312.47 | wind | 3 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 524 | 312.56 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 8 |
| 579 | 312.81 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 610 | 312.90 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 620 | 312.95 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 625 | 312.95 | humidity | 90 | 10 | > th | dose independent | rect. | 4 | 5 |
| 637 | 312.95 | wind | 1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 641 | 312.96 | wind | 1 | 720 | > th | dose independent | rect. | 20 | 8 |
| 648 | 312.98 | humidity | 90 | 720 | > th | dose dependent | no | NA | NA |
| 666 | 313.05 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 669 | 313.06 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 2 |
| 708 | 313.17 | humidity | 90 | 270 | > th | dose dependent | rect. | 5 | 13 |
| 715 | 313.20 | radiation | 1 | 30 | < th | dose independent | rect. | 4 | 4 |
| 736 | 313.25 | wind | 1 | 720 | > th | dose independent | rect. | 17 | 11 |
| 750 | 313.28 | wind | 3 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 779 | 313.35 | humidity | 80 | 270 | > th | dose independent | rect. | 5 | 4 |
| 780 | 313.35 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 794 | 313.40 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 2 |
| 797 | 313.40 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 16 |
| 798 | 313.41 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 21 | 3 |
| 801 | 313.41 | humidity | 80 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 827 | 313.50 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 863 | 313.62 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 878 | 313.66 | wind | 7 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 931 | 313.80 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 966 | 313.86 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 2 | 7 |