Os05g0222200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0222200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ABC transporter related domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.17 | 0.358 | 11.7 | 0.143 | 0.743 | 0.919 | -0.0905 | 0.605 | 0.451 | 16.4 | 17.47 | 675 | -- | -- |
| 58.41 | 0.356 | 11.7 | 0.0168 | 0.759 | 0.899 | -0.0393 | -- | 0.419 | 16.4 | 18.43 | 696 | -- | -- |
| 58.18 | 0.355 | 11.7 | 0.141 | 0.747 | 0.905 | -- | 0.584 | 0.451 | 16.4 | 17.78 | 687 | -- | -- |
| 58.4 | 0.356 | 11.7 | 0.0279 | 0.751 | 0.888 | -- | -- | 0.42 | 16.4 | 18.6 | 694 | -- | -- |
| 75.68 | 0.405 | 11.7 | 0.136 | -- | 1.29 | -- | 0.907 | 0.409 | -- | 18.68 | 398 | -- | -- |
| 72.21 | 0.398 | 11.7 | 0.273 | 0.924 | -- | 0.371 | -- | 0.578 | 17.4 | -- | -- | -- | -- |
| 72.53 | 0.399 | 11.7 | 0.273 | 0.926 | -- | -- | -- | 0.58 | 17.4 | -- | -- | -- | -- |
| 74.73 | 0.403 | 11.7 | -0.0723 | -- | 1.36 | -- | -- | 0.331 | -- | 18.8 | 387 | -- | -- |
| 58.42 | 0.356 | 11.7 | -- | 0.749 | 0.897 | -- | -- | 0.415 | 16.4 | 18.59 | 694 | -- | -- |
| 117.23 | 0.506 | 11.7 | 0.241 | -- | -- | -- | -- | 0.557 | -- | -- | -- | -- | -- |
| 74.49 | 0.404 | 11.7 | -- | 0.921 | -- | -- | -- | 0.55 | 17.4 | -- | -- | -- | -- |
| 74.86 | 0.403 | 11.7 | -- | -- | 1.34 | -- | -- | 0.341 | -- | 18.8 | 381 | -- | -- |
| 118.76 | 0.509 | 11.7 | -- | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.17 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 2 | 54.44 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 11 |
| 3 | 54.45 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 21 |
| 4 | 54.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 22 |
| 5 | 54.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 7 | 54.81 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 10 | 54.95 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 18 | 12 |
| 11 | 54.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 14 | 54.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 18 | 54.97 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 23 | 54.97 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 24 | 54.97 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 28 | 54.97 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 38 | 55.42 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 40 | 55.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 42 | 55.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 12 |
| 44 | 55.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 49 | 55.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 51 | 55.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 55 | 55.89 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 13 |
| 56 | 55.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 60 | 55.99 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 63 | 56.06 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 65 | 56.10 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 70 | 56.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 87 | 56.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 19 |
| 90 | 56.41 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 12 |
| 96 | 56.50 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 99 | 56.54 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 109 | 56.60 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 10 | 20 |
| 114 | 56.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 4 |
| 126 | 56.73 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 13 |
| 128 | 56.73 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 130 | 56.76 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 150 | 56.87 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 165 | 56.97 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 12 |
| 178 | 57.05 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 188 | 57.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 11 |
| 193 | 57.11 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 215 | 57.21 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 11 |
| 222 | 57.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 225 | 57.24 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 13 |
| 229 | 57.25 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 11 |
| 231 | 57.25 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 11 |
| 233 | 57.25 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 11 |
| 234 | 57.25 | radiation | 20.0 | 90 | < th | dose independent | rect. | 19 | 11 |
| 237 | 57.25 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 13 |
| 238 | 57.25 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 13 |
| 261 | 57.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 265 | 57.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 20 |
| 268 | 57.36 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 4 |
| 270 | 57.36 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 16 |
| 275 | 57.38 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 295 | 57.48 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 316 | 57.55 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 16 |
| 328 | 57.59 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 338 | 57.61 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 353 | 57.66 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 19 | 11 |
| 404 | 57.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 421 | 57.86 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 452 | 57.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 464 | 57.99 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 11 |
| 465 | 57.99 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 489 | 58.05 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 530 | 58.17 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 13 |
| 543 | 58.20 | humidity | 80.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 561 | 58.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 565 | 58.26 | radiation | 20.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 567 | 58.26 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 580 | 58.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 11 |
| 605 | 58.37 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 606 | 58.37 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 608 | 58.37 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 609 | 58.37 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 610 | 58.37 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 611 | 58.37 | temperature | 10.0 | 10 | > th | dose independent | rect. | 10 | 20 |
| 612 | 58.37 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 11 |
| 614 | 58.38 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 621 | 58.40 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 631 | 58.43 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 4 |
| 633 | 58.43 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 638 | 58.44 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 642 | 58.45 | temperature | 15.0 | 720 | > th | dose dependent | no | NA | NA |
| 657 | 58.46 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 663 | 58.48 | wind | 9.0 | 10 | < th | dose independent | rect. | 10 | 20 |
| 700 | 58.57 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 701 | 58.57 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 702 | 58.58 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 708 | 58.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 709 | 58.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 722 | 58.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 20 |
| 728 | 58.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 799 | 58.73 | radiation | 20.0 | 90 | < th | dose independent | rect. | 6 | 13 |
| 845 | 58.82 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 848 | 58.82 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 850 | 58.82 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 856 | 58.83 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 858 | 58.83 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 13 |
| 862 | 58.84 | wind | 3.0 | 90 | < th | dose independent | rect. | 6 | 3 |
| 863 | 58.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 10 |
| 868 | 58.85 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 886 | 58.87 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 888 | 58.87 | radiation | 40.0 | 90 | < th | dose independent | rect. | 6 | 13 |
| 902 | 58.88 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 915 | 58.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 927 | 58.93 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 977 | 59.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 986 | 59.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 20 |
| 998 | 59.02 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 4 |