Os05g0221400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 2o545-prov protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0221400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to 2o545-prov protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.33 | 0.19 | 12.7 | -0.698 | 0.364 | -0.522 | 0.213 | -0.648 | -0.0109 | 6.16 | 1015 | 6142 | -- | -- |
| 16.98 | 0.192 | 12.8 | -0.749 | 0.37 | -0.284 | 0.153 | -- | -0.0358 | 6.16 | 1013 | 9946 | -- | -- |
| 16.44 | 0.189 | 12.7 | -0.698 | 0.367 | -0.528 | -- | -0.674 | -0.0114 | 6.12 | 1015 | 6194 | -- | -- |
| 17.05 | 0.192 | 12.8 | -0.749 | 0.37 | -0.286 | -- | -- | -0.0344 | 6.15 | 1013 | 9904 | -- | -- |
| 23.33 | 0.225 | 12.7 | -0.704 | -- | -0.604 | -- | -0.781 | -0.00626 | -- | 1015 | 6144 | -- | -- |
| 19.95 | 0.209 | 12.7 | -0.621 | 0.371 | -- | 0.175 | -- | 0.0384 | 6.15 | -- | -- | -- | -- |
| 20.02 | 0.21 | 12.7 | -0.619 | 0.372 | -- | -- | -- | 0.0378 | 6.13 | -- | -- | -- | -- |
| 23.73 | 0.227 | 12.8 | -0.735 | -- | -0.348 | -- | -- | -0.0219 | -- | 1014 | 6165 | -- | -- |
| 29.86 | 0.255 | 12.7 | -- | 0.359 | -0.0925 | -- | -- | 0.0881 | 5.93 | 1009 | 17343 | -- | -- |
| 27.18 | 0.244 | 12.7 | -0.608 | -- | -- | -- | -- | 0.046 | -- | -- | -- | -- | -- |
| 30.11 | 0.257 | 12.7 | -- | 0.363 | -- | -- | -- | 0.107 | 6.22 | -- | -- | -- | -- |
| 33.73 | 0.27 | 12.7 | -- | -- | 0.294 | -- | -- | 0.186 | -- | 1012 | 47520 | -- | -- |
| 36.94 | 0.284 | 12.7 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 4 | 16.35 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 6 | 16.39 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 4 |
| 24 | 16.41 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 25 | 16.41 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 6 |
| 47 | 16.44 | humidity | 50.0 | 4320 | < th | dose independent | sin | 17 | NA |
| 90 | 16.51 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 113 | 16.53 | humidity | 50.0 | 4320 | < th | dose independent | no | NA | NA |
| 235 | 16.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 238 | 16.55 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 239 | 16.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 258 | 16.57 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 278 | 16.58 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 289 | 16.58 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 21 |
| 290 | 16.59 | humidity | 50.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 297 | 16.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 300 | 16.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 301 | 16.60 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 306 | 16.61 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 310 | 16.61 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 313 | 16.62 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 336 | 16.63 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 337 | 16.64 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 338 | 16.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 355 | 16.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 364 | 16.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 370 | 16.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 417 | 16.72 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 420 | 16.72 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 20 | NA |
| 421 | 16.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 433 | 16.73 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 14 |
| 436 | 16.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 437 | 16.74 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 483 | 16.74 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 491 | 16.74 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 7 | 16 |
| 498 | 16.75 | humidity | 50.0 | 4320 | > th | dose independent | no | NA | NA |
| 567 | 16.75 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 576 | 16.75 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 11 |
| 588 | 16.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 593 | 16.76 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 10 |
| 608 | 16.77 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 20 | NA |
| 610 | 16.77 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 20 | NA |
| 614 | 16.77 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 7 |
| 615 | 16.77 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 618 | 16.77 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 11 | 11 |
| 687 | 16.79 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 7 | 14 |
| 759 | 16.80 | atmosphere | 1015.0 | 4320 | > th | dose dependent | no | NA | NA |
| 779 | 16.80 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 22 | 23 |
| 783 | 16.81 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 785 | 16.81 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 795 | 16.81 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 836 | 16.81 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 16 | 22 |
| 855 | 16.82 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 864 | 16.82 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 879 | 16.82 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 906 | 16.83 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 6 |