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Os05g0218400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Somatic embryogenesis receptor kinase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0179) R2 : 0.527
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.946 (0.0425) R2dC : 0.516 R2C : 0.514
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.116 (0.0376) R2dN8 : 0.0129 R2N8 : 0.0102
σ : 0.337
deviance : 51.83
__
_____
C
peak time of C : 23.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.33 0.323 9.4 -0.0268 0.947 6.93 0.452 -22.3 0.141 23.9 0.05928 90 -- --
50.58 0.334 9.36 0.115 0.946 0.226 0.462 -- 0.13 23.8 0.05928 90 -- --
48.2 0.323 9.4 -0.0417 0.945 6.71 -- -21.3 0.14 23.9 0.04574 90 -- --
48.75 0.325 9.37 0.0571 0.938 1.42 -- -- 0.125 24 1.412 158 -- --
104.17 0.475 9.37 0.0104 -- 5.82 -- -17.2 0.161 -- -3.588 86 -- --
50.63 0.334 9.36 0.118 0.947 -- 0.467 -- 0.13 23.8 -- -- -- --
51.57 0.336 9.36 0.0992 0.945 -- -- -- 0.127 23.9 -- -- -- --
103.63 0.474 9.35 0.0992 -- 1.52 -- -- 0.145 -- 1.422 173 -- --
48.88 0.326 9.36 -- 0.939 1.45 -- -- 0.124 24 1.407 159 -- --
107.77 0.485 9.34 0.128 -- -- -- -- 0.14 -- -- -- -- --
51.83 0.337 9.37 -- 0.946 -- -- -- 0.116 23.9 -- -- -- --
103.03 0.473 9.34 -- -- 1.06 -- -- 0.144 -- 1.299 364 -- --
108.2 0.486 9.35 -- -- -- -- -- 0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.50 temperature 10.0 90 > th dose dependent rect. 5 10
8 44.80 temperature 25.0 270 > th dose independent rect. 9 2
9 44.82 temperature 20.0 270 > th dose dependent rect. 9 2
12 44.97 temperature 25.0 270 > th dose independent rect. 8 5
16 45.01 temperature 25.0 10 < th dose independent rect. 2 17
29 45.19 temperature 25.0 270 > th dose independent rect. 5 8
35 45.26 temperature 20.0 90 > th dose dependent rect. 9 5
38 45.28 temperature 20.0 10 > th dose dependent rect. 6 9
48 45.36 radiation 1.0 720 > th dose independent rect. 18 1
74 45.53 temperature 20.0 10 > th dose dependent rect. 9 6
87 45.60 temperature 20.0 90 > th dose independent rect. 15 14
124 45.83 temperature 20.0 10 > th dose independent rect. 15 15
136 45.91 humidity 70.0 14400 > th dose independent rect. 22 5
139 45.93 temperature 25.0 10 < th dose independent rect. 4 15
151 45.98 temperature 20.0 90 > th dose independent rect. 24 9
173 46.08 temperature 25.0 10 < th dose independent rect. 2 14
185 46.13 wind 1.0 270 > th dose independent rect. 3 10
198 46.15 temperature 30.0 10 < th dose dependent rect. 20 6
201 46.16 temperature 25.0 10 > th dose independent rect. 5 10
219 46.18 temperature 30.0 30 < th dose dependent rect. 2 17
229 46.20 temperature 25.0 10 > th dose dependent rect. 21 18
232 46.22 wind 9.0 1440 < th dose independent rect. 3 7
233 46.22 wind 1.0 30 > th dose independent rect. 21 18
247 46.24 temperature 25.0 10 > th dose dependent rect. 23 16
249 46.25 wind 7.0 270 < th dose independent rect. 19 18
252 46.25 temperature 10.0 90 > th dose dependent rect. 24 9
261 46.27 temperature 20.0 10 > th dose independent rect. 17 13
269 46.28 wind 7.0 270 < th dose independent rect. 9 15
283 46.30 temperature 25.0 90 > th dose dependent rect. 21 17
300 46.33 temperature 25.0 10 < th dose independent rect. 2 12
323 46.35 temperature 20.0 30 > th dose independent rect. 2 19
342 46.37 wind 7.0 270 < th dose independent rect. 19 16
376 46.41 temperature 30.0 270 < th dose dependent rect. 19 5
387 46.43 atmosphere 1010.0 10 < th dose independent rect. 2 7
391 46.43 humidity 50.0 10 > th dose independent rect. 10 16
392 46.43 temperature 20.0 30 > th dose independent rect. 15 18
399 46.44 wind 1.0 10 > th dose independent rect. 23 16
404 46.45 precipitation 0.1 270 < th dose independent rect. 9 15
407 46.45 precipitation 0.1 270 < th dose dependent rect. 9 15
422 46.48 radiation 1.0 30 > th dose independent sin 1 NA
428 46.49 wind 5.0 270 < th dose independent rect. 5 8
449 46.52 atmosphere 1010.0 30 < th dose independent rect. 24 9
450 46.52 atmosphere 995.0 90 > th dose independent rect. 5 10
452 46.52 temperature 20.0 30 > th dose independent rect. 24 21
456 46.53 temperature 20.0 270 > th dose independent rect. 13 6
481 46.55 temperature 25.0 90 > th dose dependent sin 3 NA
488 46.56 precipitation 0.1 270 < th dose independent rect. 19 18
497 46.56 precipitation 0.1 270 < th dose dependent rect. 19 18
505 46.58 humidity 50.0 10 > th dose independent rect. 10 14
510 46.59 temperature 15.0 270 > th dose independent rect. 19 18
512 46.59 temperature 30.0 270 < th dose dependent rect. 21 1
519 46.60 temperature 10.0 270 > th dose independent rect. 13 6
521 46.60 atmosphere 1010.0 270 < th dose independent rect. 13 6
525 46.60 humidity 50.0 270 > th dose independent rect. 19 18
526 46.60 atmosphere 995.0 270 > th dose independent rect. 19 18
533 46.61 temperature 20.0 90 > th dose independent rect. 24 5
534 46.61 precipitation 0.1 270 < th dose independent rect. 19 16
539 46.61 precipitation 0.1 270 < th dose dependent rect. 19 16
540 46.62 humidity 70.0 14400 > th dose independent rect. 22 3
543 46.62 humidity 50.0 270 > th dose independent rect. 19 16
548 46.62 temperature 10.0 90 > th dose dependent rect. 9 15
554 46.63 wind 1.0 270 > th dose independent rect. 19 18
561 46.63 temperature 30.0 10 < th dose dependent rect. 4 15
566 46.64 precipitation 0.1 90 < th dose independent rect. 5 10
567 46.64 temperature 15.0 270 > th dose independent rect. 19 16
573 46.64 precipitation 0.1 90 < th dose dependent rect. 5 10
575 46.65 temperature 20.0 10 > th dose independent rect. 24 6
577 46.65 wind 7.0 270 < th dose independent rect. 17 22
583 46.66 temperature 25.0 30 < th dose independent rect. 20 6
586 46.66 temperature 10.0 270 > th dose independent rect. 11 8
589 46.66 atmosphere 1015.0 270 < th dose independent rect. 11 8
592 46.66 atmosphere 995.0 270 > th dose independent rect. 19 16
595 46.66 temperature 10.0 90 > th dose dependent rect. 15 14
606 46.68 temperature 25.0 10 > th dose independent rect. 5 12
607 46.68 temperature 25.0 270 < th dose independent rect. 1 14
610 46.69 wind 7.0 270 < th dose independent rect. 19 5
615 46.70 wind 9.0 4320 < th dose independent rect. 1 5
616 46.70 temperature 15.0 270 > th dose independent rect. 19 5
617 46.70 wind 1.0 270 > th dose independent rect. 13 6
619 46.70 temperature 15.0 270 > th dose independent rect. 5 8
621 46.70 radiation 1.0 90 > th dose independent rect. 4 11
633 46.70 radiation 1.0 30 < th dose independent rect. 2 19
635 46.70 wind 9.0 4320 > th dose dependent rect. 15 2
639 46.71 precipitation 0.1 270 < th dose independent rect. 5 8
647 46.71 precipitation 0.1 270 < th dose dependent rect. 5 8
651 46.72 atmosphere 995.0 270 > th dose independent rect. 5 8
652 46.72 atmosphere 1015.0 270 < th dose independent rect. 5 8
654 46.72 temperature 30.0 270 < th dose independent rect. 24 9
659 46.72 temperature 20.0 30 > th dose independent rect. 24 23
663 46.72 temperature 10.0 270 > th dose dependent rect. 13 16
665 46.73 wind 9.0 4320 < th dose independent rect. 15 2
666 46.73 wind 9.0 270 < th dose independent rect. 13 6
668 46.73 temperature 10.0 90 > th dose independent rect. 5 10
669 46.73 atmosphere 1015.0 90 < th dose independent rect. 5 10
671 46.73 temperature 10.0 90 > th dose independent rect. 15 14
679 46.74 wind 7.0 10 < th dose independent rect. 21 5
681 46.74 wind 1.0 270 > th dose independent rect. 11 8
683 46.74 radiation 40.0 90 < th dose independent rect. 15 14
699 46.75 radiation 40.0 90 < th dose independent rect. 2 18
703 46.75 atmosphere 1015.0 270 < th dose dependent rect. 13 6
708 46.76 radiation 1.0 30 < th dose independent sin 0 NA
709 46.76 wind 9.0 1440 < th dose independent rect. 1 9
722 46.77 temperature 10.0 270 > th dose independent rect. 24 9
724 46.77 humidity 50.0 270 > th dose independent rect. 24 9
725 46.77 atmosphere 995.0 270 > th dose independent rect. 24 9
726 46.77 atmosphere 1015.0 270 < th dose independent rect. 24 9
727 46.77 temperature 10.0 270 > th dose independent rect. 9 15
731 46.77 temperature 15.0 270 > th dose independent rect. 24 19
740 46.78 wind 9.0 270 < th dose independent rect. 24 9
742 46.78 wind 1.0 270 > th dose independent rect. 19 16
746 46.78 atmosphere 1015.0 270 < th dose independent rect. 24 19
754 46.79 temperature 15.0 10 > th dose independent rect. 21 5
756 46.79 humidity 50.0 270 > th dose independent rect. 19 5
758 46.79 atmosphere 995.0 270 > th dose independent rect. 19 5
759 46.79 radiation 1.0 270 < th dose independent rect. 19 5
774 46.79 radiation 1.0 270 < th dose dependent rect. 19 5
787 46.80 radiation 40.0 90 < th dose independent rect. 13 8
792 46.81 precipitation 0.1 270 < th dose independent rect. 18 6
797 46.81 precipitation 0.1 270 < th dose dependent rect. 18 6
812 46.82 radiation 1.0 30 < th dose independent rect. 4 17
816 46.82 temperature 15.0 270 > th dose dependent rect. 24 5
825 46.83 temperature 25.0 10 > th dose independent rect. 9 8
831 46.83 wind 7.0 10 < th dose independent rect. 21 17
845 46.84 radiation 1.0 30 < th dose independent rect. 2 16
863 46.85 wind 9.0 270 < th dose independent rect. 13 16
865 46.85 precipitation 0.1 270 < th dose independent rect. 17 21
878 46.85 precipitation 0.1 270 < th dose dependent rect. 17 21
890 46.86 temperature 20.0 10 > th dose independent rect. 17 16
894 46.86 radiation 40.0 14400 < th dose dependent rect. 22 5
900 46.86 temperature 30.0 30 < th dose dependent rect. 2 14
902 46.87 temperature 25.0 10 < th dose independent sin 1 NA
908 46.87 humidity 50.0 10 > th dose independent rect. 21 5
914 46.87 atmosphere 995.0 10 > th dose independent rect. 21 5
916 46.87 radiation 1.0 10 < th dose independent rect. 21 5
934 46.87 temperature 10.0 10 > th dose independent rect. 2 19
938 46.87 atmosphere 1015.0 10 < th dose independent rect. 2 19
942 46.87 radiation 1.0 90 < th dose dependent sin 1 NA
943 46.87 radiation 1.0 10 < th dose dependent rect. 21 5
962 46.88 temperature 10.0 1440 > th dose independent rect. 22 5
966 46.88 temperature 30.0 1440 < th dose independent rect. 22 5
970 46.88 humidity 50.0 1440 > th dose independent rect. 22 5
978 46.88 atmosphere 995.0 1440 > th dose independent rect. 22 5
979 46.88 radiation 1.0 1440 < th dose independent rect. 22 5