Os05g0218100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0218100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.24 | 0.509 | 6.77 | 0.289 | 1.18 | -0.942 | 0.24 | 1.28 | -0.55 | 6.7 | 23.41 | 2442 | -- | -- |
| 118.11 | 0.506 | 6.8 | -0.0834 | 1.18 | -0.795 | 0.267 | -- | -0.646 | 6.72 | 23.12 | 2465 | -- | -- |
| 117.31 | 0.504 | 6.77 | 0.311 | 1.18 | -0.944 | -- | 1.39 | -0.554 | 6.69 | 23.7 | 2465 | -- | -- |
| 118.12 | 0.506 | 6.81 | -0.0526 | 1.18 | -0.822 | -- | -- | -0.641 | 6.71 | 23.26 | 2458 | -- | -- |
| 153.29 | 0.577 | 6.79 | 0.151 | -- | -1.58 | -- | 0.688 | -0.508 | -- | 22.79 | 523 | -- | -- |
| 140.2 | 0.555 | 6.84 | -0.359 | 1.22 | -- | 0.179 | -- | -0.787 | 7.16 | -- | -- | -- | -- |
| 140.29 | 0.555 | 6.84 | -0.355 | 1.22 | -- | -- | -- | -0.787 | 7.16 | -- | -- | -- | -- |
| 153.57 | 0.577 | 6.82 | -0.00598 | -- | -1.53 | -- | -- | -0.542 | -- | 22.64 | 522 | -- | -- |
| 118.22 | 0.506 | 6.81 | -- | 1.19 | -0.835 | -- | -- | -0.635 | 6.73 | 23.3 | 2464 | -- | -- |
| 218.78 | 0.691 | 6.87 | -0.332 | -- | -- | -- | -- | -0.766 | -- | -- | -- | -- | -- |
| 143.61 | 0.561 | 6.83 | -- | 1.22 | -- | -- | -- | -0.748 | 7.18 | -- | -- | -- | -- |
| 153.57 | 0.577 | 6.82 | -- | -- | -1.53 | -- | -- | -0.541 | -- | 22.64 | 522 | -- | -- |
| 221.7 | 0.695 | 6.86 | -- | -- | -- | -- | -- | -0.729 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.33 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 8 | 113.16 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 12 | 114.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 14 | 114.50 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 17 |
| 24 | 115.33 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 33 | 115.57 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 43 | 115.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 50 | 116.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 51 | 116.11 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 5 |
| 76 | 116.70 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 81 | 116.80 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 82 | 116.82 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 86 | 116.89 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 10 | NA |
| 100 | 117.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 119 | 117.26 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 141 | 117.53 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 151 | 117.59 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 159 | 117.63 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 168 | 117.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 172 | 117.75 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 181 | 117.82 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 206 | 117.95 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 208 | 117.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 209 | 117.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 226 | 118.07 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 236 | 118.14 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 21 |
| 239 | 118.17 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 257 | 118.28 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 289 | 118.44 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 297 | 118.48 | temperature | 20.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 304 | 118.50 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 331 | 118.58 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 17 |
| 337 | 118.61 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 361 | 118.71 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 362 | 118.71 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 439 | 118.91 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 446 | 118.93 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 17 | 9 |
| 480 | 119.02 | temperature | 10.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 484 | 119.03 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 498 | 119.06 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 499 | 119.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 500 | 119.06 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 509 | 119.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 515 | 119.11 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 532 | 119.15 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 540 | 119.17 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 541 | 119.17 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 542 | 119.17 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 552 | 119.19 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 568 | 119.23 | humidity | 80.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 590 | 119.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 596 | 119.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 597 | 119.29 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 600 | 119.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 602 | 119.30 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 686 | 119.43 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 699 | 119.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 700 | 119.44 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 716 | 119.46 | temperature | 25.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 725 | 119.47 | temperature | 30.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 744 | 119.49 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 745 | 119.49 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 826 | 119.57 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 10 | 14 |
| 837 | 119.59 | wind | 7.0 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 860 | 119.61 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 19 |
| 867 | 119.62 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 986 | 119.71 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 19 |