Os05g0215700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0215700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 265.88 | 0.766 | 10.3 | -1.3 | 2.16 | 1.84 | 2.49 | 0.502 | 0.593 | 18.9 | 20 | 10 | -- | -- |
| 266.83 | 0.761 | 10.3 | -1.31 | 2.18 | 1.76 | 2.73 | -- | 0.589 | 19.1 | 20 | 9 | -- | -- |
| 279.86 | 0.779 | 10.3 | -1.31 | 2.19 | 1.8 | -- | 1.1 | 0.595 | 19 | 20.33 | 8 | -- | -- |
| 284.96 | 0.786 | 10.3 | -1.28 | 2.11 | 1.89 | -- | -- | 0.604 | 18.8 | 20 | 5 | -- | -- |
| 505.02 | 1.05 | 10.2 | -1.32 | -- | 2.21 | -- | 1.33 | 0.546 | -- | 15.55 | 5 | -- | -- |
| 328.48 | 0.85 | 10.3 | -1.33 | 3.21 | -- | 2.25 | -- | 0.577 | 21.2 | -- | -- | -- | -- |
| 346.29 | 0.871 | 10.3 | -1.41 | 3.2 | -- | -- | -- | 0.574 | 21.2 | -- | -- | -- | -- |
| 502.17 | 1.04 | 10.2 | -1.43 | -- | 2.19 | -- | -- | 0.563 | -- | 13.04 | 2 | -- | -- |
| 333.47 | 0.851 | 10.3 | -- | 2.18 | 1.89 | -- | -- | 0.73 | 18.8 | 20.73 | 5 | -- | -- |
| 940.27 | 1.43 | 10.2 | -1.4 | -- | -- | -- | -- | 0.559 | -- | -- | -- | -- | -- |
| 398.49 | 0.934 | 10.3 | -- | 3.2 | -- | -- | -- | 0.731 | 21.2 | -- | -- | -- | -- |
| 555.88 | 1.1 | 10.2 | -- | -- | 2.2 | -- | -- | 0.72 | -- | 14.51 | 2 | -- | -- |
| 991.64 | 1.47 | 10.2 | -- | -- | -- | -- | -- | 0.714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 260.80 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 22 |
| 7 | 263.02 | radiation | 20.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 18 | 267.26 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 20 | 267.68 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 22 | 268.30 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 30 | 269.90 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 31 | 269.90 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 34 | 270.08 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 47 | 271.58 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 49 | 271.72 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 19 |
| 57 | 272.40 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 61 | 272.71 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 84 | 274.08 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 7 |
| 89 | 274.54 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 90 | 274.56 | radiation | 10.0 | 10 | > th | dose independent | sin | 0 | NA |
| 92 | 274.61 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 93 | 274.68 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 1 | 17 |
| 108 | 275.16 | radiation | 10.0 | 10 | < th | dose independent | sin | 1 | NA |
| 115 | 275.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 20 |
| 116 | 275.47 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 125 | 275.80 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 131 | 276.04 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 134 | 276.12 | radiation | 20.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 155 | 276.73 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 156 | 276.73 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 172 | 277.07 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 17 |
| 176 | 277.19 | radiation | 20.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 177 | 277.20 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 7 |
| 183 | 277.29 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 22 |
| 211 | 277.82 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 214 | 277.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 23 |
| 215 | 277.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 244 | 278.33 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 21 |
| 246 | 278.34 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 252 | 278.42 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 306 | 278.82 | radiation | 30.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 328 | 279.11 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 333 | 279.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 16 |
| 334 | 279.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 335 | 279.16 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 339 | 279.23 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 350 | 279.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 351 | 279.41 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 353 | 279.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 424 | 280.07 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 9 |
| 455 | 280.27 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 18 |
| 457 | 280.27 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 468 | 280.35 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 18 |
| 481 | 280.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 484 | 280.47 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 493 | 280.55 | humidity | 90.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 534 | 280.93 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 576 | 281.07 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 599 | 281.27 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 13 | 20 |
| 600 | 281.28 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 7 |
| 605 | 281.36 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 641 | 281.69 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 660 | 281.89 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 666 | 281.96 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 18 |
| 683 | 282.03 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 698 | 282.12 | humidity | 70.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 703 | 282.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 761 | 282.31 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 771 | 282.35 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 795 | 282.40 | radiation | 10.0 | 10 | > th | dose independent | no | NA | NA |
| 875 | 282.41 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 907 | 282.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 908 | 282.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 909 | 282.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 913 | 282.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 921 | 282.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 954 | 282.72 | radiation | 10.0 | 10 | < th | dose independent | no | NA | NA |