Os05g0214900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0214900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.99 | 0.379 | 9.9 | -0.959 | 0.39 | 0.943 | -0.0823 | -2.36 | -0.417 | 21.4 | 25.83 | 1239 | -- | -- |
| 66.77 | 0.381 | 9.85 | -0.411 | 0.362 | 0.737 | -0.0232 | -- | -0.305 | 21.5 | 25.85 | 1187 | -- | -- |
| 64.96 | 0.375 | 9.9 | -0.989 | 0.404 | 0.946 | -- | -2.5 | -0.401 | 21.5 | 26.1 | 1260 | -- | -- |
| 66.57 | 0.38 | 9.83 | -0.364 | 0.393 | 0.695 | -- | -- | -0.265 | 21.5 | 26.2 | 1216 | -- | -- |
| 70.82 | 0.392 | 9.88 | -0.886 | -- | 1.15 | -- | -2.46 | -0.408 | -- | 25.57 | 996 | -- | -- |
| 85.1 | 0.432 | 9.82 | -0.141 | 0.477 | -- | 0.258 | -- | -0.234 | 22.6 | -- | -- | -- | -- |
| 85.3 | 0.432 | 9.82 | -0.15 | 0.479 | -- | -- | -- | -0.234 | 22.3 | -- | -- | -- | -- |
| 72.54 | 0.397 | 9.82 | -0.389 | -- | 0.925 | -- | -- | -0.307 | -- | 25.24 | 986 | -- | -- |
| 69.82 | 0.389 | 9.82 | -- | 0.401 | 0.622 | -- | -- | -0.217 | 21.6 | 26.4 | 1214 | -- | -- |
| 99.31 | 0.466 | 9.81 | -0.143 | -- | -- | -- | -- | -0.232 | -- | -- | -- | -- | -- |
| 85.89 | 0.434 | 9.82 | -- | 0.478 | -- | -- | -- | -0.217 | 22.3 | -- | -- | -- | -- |
| 76.28 | 0.407 | 9.81 | -- | -- | 0.838 | -- | -- | -0.243 | -- | 25.6 | 985 | -- | -- |
| 99.85 | 0.466 | 9.8 | -- | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.35 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 3 | 60.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 7 | 61.14 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 8 | 61.38 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 10 | 61.57 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 12 | 61.70 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 13 | 61.97 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 24 | 62.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 26 | 62.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 35 | 62.38 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 37 | 62.72 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 40 | 62.92 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 51 | 63.13 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 63 | 63.26 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 76 | 63.35 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 80 | 63.43 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 82 | 63.43 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 111 | 63.52 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 115 | 63.56 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 131 | 63.68 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 135 | 63.73 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 159 | 63.90 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 175 | 63.98 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 15 |
| 176 | 63.99 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 189 | 64.13 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 226 | 64.53 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 230 | 64.54 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 232 | 64.55 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 243 | 64.64 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 259 | 64.64 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 269 | 64.69 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 274 | 64.73 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 15 |
| 275 | 64.73 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 276 | 64.73 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 284 | 64.76 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 286 | 64.77 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 310 | 64.85 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 316 | 64.86 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 333 | 64.90 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 361 | 64.95 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 365 | 64.96 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 22 |
| 387 | 65.06 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 396 | 65.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 2 |
| 397 | 65.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 422 | 65.12 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 424 | 65.12 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 428 | 65.14 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 435 | 65.15 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 438 | 65.15 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 449 | 65.16 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 477 | 65.19 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 504 | 65.24 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 508 | 65.25 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 557 | 65.35 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 583 | 65.39 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 9 |
| 617 | 65.44 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 621 | 65.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 636 | 65.51 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 657 | 65.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 697 | 65.67 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 731 | 65.72 | humidity | 80.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 732 | 65.72 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 736 | 65.73 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 21 |
| 747 | 65.75 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 773 | 65.77 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 785 | 65.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 788 | 65.81 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 792 | 65.82 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 795 | 65.82 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 798 | 65.82 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 799 | 65.82 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 804 | 65.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 21 |
| 806 | 65.82 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 807 | 65.82 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 810 | 65.83 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 815 | 65.84 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 829 | 65.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 841 | 65.94 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 879 | 66.01 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 883 | 66.02 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 900 | 66.05 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 915 | 66.11 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 921 | 66.14 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 947 | 66.24 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 954 | 66.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 963 | 66.25 | humidity | 80.0 | 720 | < th | dose independent | rect. | 8 | 14 |
| 967 | 66.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 975 | 66.27 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 997 | 66.29 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 10 |