FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0211100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.78 (0.0972) R2 : 0.48
β1 : 0.809 (0.353) R2dD : 0.00738 R2D : -0.0438
β2 : 3.14 (0.218) R2dC : 0.241 R2C : 0.201
β3 : 21.2 (2.09) R2dE : 0.8 R2E : -0.412
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 51.8 (6.69) R2dD*E : 0.466 R2D*E : -0.661
γ1 : 2.16 (0.196) R2dN8 : 0.19 R2N8 : 0.12
σ : 1.7
deviance : 1327.68
__
_____
C
peak time of C : 11
E
wheather : wind
threshold : 9.7
memory length : 306
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 3.55
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
1327.57 1.71 5.78 0.8 3.12 20.3 0.743 48.8 2.16 10.9 9.68 294 3.5 --
1588.56 1.86 5.54 -0.162 3.55 19.2 1.64 -- 2.26 10.9 9.464 172 6.42 --
1327.68 1.7 5.78 0.809 3.14 21.2 -- 51.8 2.16 11 9.7 306 3.55 --
1535.24 1.82 5.41 -0.149 3.15 16 -- -- 1.99 10.6 9.5 167 7.14 --
1925.46 2.04 5.85 0.831 -- 18.5 -- 41.5 2.02 -- 9.6 292 3.34 --
1664.63 1.91 5.57 -0.528 2.96 -- 1.55 -- 1.97 11.1 -- -- -- --
1674.84 1.92 5.57 -0.464 2.95 -- -- -- 1.97 11.2 -- -- -- --
2060.73 2.11 5.61 -0.205 -- 9.23 -- -- 2.09 -- 9.4 170 4.97 --
1492.43 1.8 5.37 -- 3.25 11.6 -- -- 2.38 10.8 9.408 171 5.79 --
2219.03 2.2 5.64 -0.534 -- -- -- -- 1.95 -- -- -- -- --
1680.5 1.92 5.56 -- 2.96 -- -- -- 2.02 11.2 -- -- -- --
2060.89 2.11 5.61 -- -- 9.21 -- -- 2.1 -- 9.4 170 4.91 --
2226.56 2.2 5.63 -- -- -- -- -- 2.01 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 1364.83 wind 9 720 > th dose dependent rect. 19 22
9 1371.46 wind 7 720 > th dose dependent rect. 15 22
13 1373.31 wind 9 720 > th dose dependent rect. 1 16
17 1374.10 wind 9 720 > th dose dependent rect. 15 1
18 1374.70 wind 9 720 > th dose dependent rect. 12 4
19 1374.81 wind 9 720 > th dose dependent rect. 9 8
32 1377.96 wind 9 720 > th dose independent rect. 12 4
35 1379.03 wind 9 720 > th dose dependent rect. 13 2
37 1379.40 wind 9 720 > th dose independent rect. 18 23
41 1380.59 wind 9 270 > th dose dependent sin 10 NA
67 1387.17 wind 7 720 > th dose dependent no NA NA
68 1387.17 wind 7 720 > th dose dependent rect. 7 22
71 1387.36 wind 7 720 > th dose dependent rect. 4 23
80 1387.57 wind 7 720 > th dose dependent rect. 24 23
88 1388.25 wind 7 720 > th dose dependent rect. 11 23
125 1389.95 wind 9 270 > th dose independent sin 11 NA
127 1390.09 wind 9 720 > th dose independent rect. 1 16
154 1391.94 wind 9 720 > th dose dependent sin 2 NA
161 1392.38 wind 9 720 > th dose independent rect. 9 8
185 1393.46 wind 9 720 < th dose independent no NA NA
194 1394.38 wind 9 720 > th dose independent rect. 11 23
202 1394.96 wind 9 720 > th dose dependent sin 8 NA
203 1395.06 wind 7 720 > th dose independent rect. 14 23
206 1395.47 wind 9 720 > th dose dependent rect. 11 15
228 1396.14 wind 9 720 > th dose independent rect. 11 15
241 1396.30 wind 9 720 > th dose dependent rect. 11 12
260 1396.92 wind 9 720 > th dose independent no NA NA
261 1396.92 wind 9 720 > th dose independent rect. 9 17
276 1396.92 wind 9 720 > th dose independent rect. 1 22
300 1397.28 wind 9 720 > th dose independent rect. 11 12
325 1398.06 wind 9 720 > th dose independent rect. 9 14
386 1398.61 wind 9 720 > th dose independent sin 23 NA
399 1398.86 wind 1 14400 < th dose independent rect. 20 4
433 1399.25 wind 7 720 < th dose independent rect. 20 23
495 1401.13 wind 9 720 < th dose independent sin 19 NA
590 1403.47 wind 9 720 < th dose independent sin 22 NA
725 1405.85 wind 7 720 < th dose independent rect. 15 23
745 1406.28 wind 7 720 < th dose independent rect. 7 18
789 1407.39 wind 7 720 < th dose independent rect. 7 23
811 1408.04 wind 9 1440 < th dose independent rect. 3 18
827 1408.47 wind 9 1440 < th dose independent rect. 12 3
830 1408.51 wind 9 1440 < th dose independent rect. 1 20
832 1408.55 wind 9 1440 < th dose independent rect. 11 10
856 1409.07 wind 9 1440 < th dose independent rect. 18 23
887 1410.30 wind 9 1440 < th dose independent rect. 11 20
893 1410.49 wind 9 1440 < th dose independent rect. 1 23
909 1410.99 wind 9 1440 < th dose independent rect. 11 13
918 1411.12 wind 7 720 < th dose independent rect. 4 23
923 1411.55 wind 9 1440 < th dose independent rect. 12 1
928 1411.72 wind 9 1440 < th dose independent rect. 11 23
932 1411.84 wind 9 1440 < th dose independent rect. 11 6
963 1412.89 wind 9 1440 < th dose independent rect. 3 14
974 1413.28 wind 9 1440 < th dose independent rect. 1 16
976 1413.30 wind 7 720 < th dose independent rect. 7 20
994 1413.71 wind 9 1440 < th dose independent rect. 9 12