Os05g0210700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0210700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 292.89 | 0.804 | 3.2 | -0.35 | 0.202 | 28 | -1.05 | -98.5 | -0.15 | 6.97 | 0.9933 | 206 | 13 | 0.783 |
| 708.81 | 1.24 | 2.9 | 0.472 | 0.15 | 22.7 | 1.6 | -- | 0.748 | 12.2 | 0.1548 | 21 | 13.6 | 0.803 |
| 295.37 | 0.8 | 3.21 | -0.326 | 0.213 | 28 | -- | -97.9 | -0.147 | 8.27 | 1.015 | 206 | 13 | 0.783 |
| 308.75 | 0.818 | 3.1 | 0.071 | 0.195 | 4.72 | -- | -- | -0.239 | 8.73 | 0.4458 | 24 | 13.7 | 4.07 |
| 297.77 | 0.804 | 3.2 | -0.354 | -- | 27.8 | -- | -97.6 | -0.14 | -- | 0.8771 | 217 | 13 | 0.966 |
| 325.98 | 0.846 | 3.09 | 0.114 | 0.192 | -- | -0.799 | -- | -0.175 | 7.93 | -- | -- | -- | -- |
| 327.06 | 0.847 | 3.09 | 0.0973 | 0.216 | -- | -- | -- | -0.172 | 10.1 | -- | -- | -- | -- |
| 310.91 | 0.821 | 3.09 | 0.106 | -- | 4.47 | -- | -- | -0.227 | -- | 0.3977 | 24 | 13.7 | 3.85 |
| 308.76 | 0.818 | 3.1 | -- | 0.232 | 4.57 | -- | -- | -0.224 | 8.73 | 0.4779 | 27 | 13.7 | 4.01 |
| 329.87 | 0.849 | 3.09 | 0.0944 | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
| 327.31 | 0.846 | 3.09 | -- | 0.215 | -- | -- | -- | -0.183 | 10.1 | -- | -- | -- | -- |
| 310.83 | 0.821 | 3.09 | -- | -- | 4.4 | -- | -- | -0.17 | -- | 0.4892 | 22 | 13.7 | 4.07 |
| 330.11 | 0.848 | 3.09 | -- | -- | -- | -- | -- | -0.182 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 297.36 | wind | 1.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 2 | 301.57 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 3 | 301.71 | wind | 1.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 13 | 305.87 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 14 | 306.02 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 15 | 306.02 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 71 | 306.27 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 75 | 306.47 | wind | 3.0 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 80 | 306.63 | radiation | 40.0 | 30 | > th | dose independent | sin | 11 | NA |
| 81 | 306.63 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 82 | 306.84 | radiation | 40.0 | 30 | > th | dose independent | rect. | 9 | 2 |
| 127 | 307.33 | wind | 1.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 153 | 307.98 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 158 | 308.31 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 160 | 308.42 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 183 | 308.77 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 3 |
| 184 | 308.77 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 197 | 309.39 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 216 | 309.43 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 219 | 309.47 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 227 | 309.67 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 232 | 309.89 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 290 | 310.11 | temperature | 30.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 317 | 310.30 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 322 | 310.35 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 324 | 310.38 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 349 | 310.55 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 374 | 311.11 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 379 | 311.20 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 392 | 311.41 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 414 | 311.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 10 |
| 418 | 311.75 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 423 | 311.80 | temperature | 30.0 | 10 | > th | dose independent | rect. | 13 | 6 |
| 459 | 312.03 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 463 | 312.11 | wind | 1.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 475 | 312.24 | wind | 1.0 | 270 | < th | dose independent | rect. | 11 | 1 |
| 488 | 312.30 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 18 |
| 511 | 312.44 | humidity | 80.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 532 | 312.57 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 534 | 312.57 | radiation | 10.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 536 | 312.57 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 539 | 312.59 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 540 | 312.62 | humidity | 80.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 549 | 312.71 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 606 | 312.93 | temperature | 25.0 | 30 | > th | dose independent | rect. | 3 | 8 |
| 712 | 313.18 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 724 | 313.23 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 11 |
| 736 | 313.31 | humidity | 70.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 755 | 313.43 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 782 | 313.48 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 783 | 313.49 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 813 | 313.67 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 10 | 8 |
| 840 | 313.87 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 896 | 314.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 901 | 314.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 917 | 314.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 919 | 314.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 925 | 314.19 | temperature | 20.0 | 270 | < th | dose independent | sin | 3 | NA |
| 930 | 314.20 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 944 | 314.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 12 |
| 996 | 314.42 | wind | 3.0 | 10 | < th | dose independent | rect. | 9 | 2 |
| 998 | 314.42 | humidity | 80.0 | 90 | < th | dose independent | rect. | 17 | 18 |