FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0210400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0488) R2 : 0.0822
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.08 (0.83) R2dE : 0.0755 R2E : 0.074
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.179 (0.103) R2dN8 : 0.00817 R2N8 : 0.00668
σ : 0.918
deviance : 388.42
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 2.561
memory length : 89
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.9
open length of G : 2.2

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
375.75 0.911 2.98 0.158 0.178 16.3 -0.377 55.2 -0.156 19.5 3.144 88 4.05 3
388.59 0.918 2.94 0.0111 0.159 5.08 0.075 -- -0.148 15 2.389 87 4.75 2.18
374.7 0.902 2.98 0.173 0.174 16.6 -- 56.9 -0.159 17.9 3.142 89 4.06 2.89
387.87 0.917 2.96 0.0559 0.132 5.28 -- -- -0.161 15 2.465 89 4.82 2.28
375.68 0.903 2.98 0.197 -- 18.2 -- 64.3 -0.147 -- 3.278 87 4.13 2.82
418.5 0.959 2.96 -0.0202 0.00654 -- 0.665 -- -0.189 10.9 -- -- -- --
420.17 0.96 2.96 0.009 0.0598 -- -- -- -0.185 16.9 -- -- -- --
388.41 0.918 2.95 0.0437 -- 5.21 -- -- -0.171 -- 2.6 87 4.9 2.15
386.44 0.916 2.97 -- 0.211 5.14 -- -- -0.205 18.1 2.36 89 4.9 2.2
420.36 0.958 2.96 0.00679 -- -- -- -- -0.187 -- -- -- -- --
420.18 0.959 2.96 -- 0.0596 -- -- -- -0.186 16.9 -- -- -- --
388.42 0.918 2.96 -- -- 5.08 -- -- -0.179 -- 2.561 89 4.9 2.2
420.36 0.957 2.96 -- -- -- -- -- -0.188 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 377.12 wind 3.0 90 > th dose dependent rect. 4 3
3 383.33 temperature 25.0 90 < th dose dependent rect. 6 1
4 383.92 temperature 25.0 270 < th dose dependent rect. 3 4
7 384.60 temperature 25.0 90 < th dose dependent rect. 6 3
8 385.20 humidity 50.0 90 > th dose independent rect. 9 21
10 385.69 wind 3.0 90 > th dose independent rect. 5 2
14 385.94 temperature 30.0 10 < th dose dependent rect. 6 2
18 386.45 temperature 25.0 10 < th dose independent rect. 6 2
21 386.53 wind 5.0 270 < th dose independent rect. 13 19
24 386.60 temperature 20.0 90 < th dose dependent rect. 7 11
27 386.92 wind 5.0 4320 < th dose independent rect. 19 6
29 387.15 temperature 25.0 90 < th dose independent rect. 6 2
30 387.16 wind 5.0 4320 > th dose independent rect. 19 6
31 387.19 temperature 20.0 270 < th dose independent rect. 3 4
32 387.26 temperature 20.0 90 < th dose independent rect. 7 11
34 387.35 temperature 30.0 270 < th dose dependent rect. 23 9
36 387.38 temperature 20.0 10 < th dose independent rect. 6 13
38 387.38 wind 3.0 4320 > th dose dependent rect. 20 5
43 387.59 temperature 20.0 10 < th dose independent rect. 8 11
72 388.25 temperature 20.0 30 < th dose dependent rect. 6 13
79 388.48 temperature 20.0 270 < th dose independent rect. 1 7
119 389.69 temperature 20.0 270 > th dose independent rect. 23 13
132 390.15 humidity 50.0 10 < th dose independent rect. 15 3
178 390.94 humidity 50.0 10 < th dose dependent rect. 15 3
198 391.06 wind 5.0 270 < th dose independent rect. 21 11
199 391.07 temperature 20.0 10 < th dose independent rect. 6 7
205 391.15 humidity 50.0 30 < th dose independent sin 11 NA
227 391.45 atmosphere 1000.0 10 > th dose independent rect. 7 1
230 391.47 humidity 50.0 270 > th dose independent rect. 8 5
245 391.59 temperature 20.0 10 < th dose independent rect. 8 5
253 391.73 humidity 50.0 270 > th dose independent rect. 8 7
260 391.81 wind 1.0 10 > th dose dependent rect. 2 6
290 392.18 atmosphere 995.0 10 > th dose dependent rect. 7 1
327 392.38 humidity 50.0 30 > th dose independent sin 11 NA
346 392.41 temperature 20.0 270 < th dose independent rect. 3 15
353 392.46 humidity 50.0 30 < th dose dependent sin 12 NA
354 392.47 wind 5.0 43200 > th dose independent rect. 19 2
393 392.62 wind 1.0 270 > th dose independent rect. 3 5
401 392.70 precipitation 0.1 10 > th dose independent rect. 5 13
404 392.70 precipitation 0.1 10 > th dose dependent rect. 5 13
408 392.77 wind 5.0 43200 > th dose independent rect. 18 4
413 392.79 wind 5.0 43200 < th dose independent rect. 19 2
416 392.84 humidity 90.0 10 < th dose independent rect. 3 5
430 392.93 humidity 50.0 270 > th dose independent rect. 8 13
461 393.07 wind 5.0 10 > th dose independent rect. 8 1
463 393.07 wind 5.0 10 > th dose dependent rect. 8 1
497 393.13 wind 5.0 43200 > th dose independent rect. 18 7
531 393.30 humidity 90.0 90 > th dose dependent rect. 16 6
554 393.47 wind 5.0 43200 < th dose independent rect. 18 7
566 393.53 humidity 50.0 30 > th dose independent rect. 11 19
568 393.54 humidity 90.0 90 > th dose dependent rect. 13 9
585 393.66 wind 9.0 270 < th dose dependent rect. 12 20
602 393.73 wind 5.0 43200 > th dose dependent rect. 18 4
605 393.76 wind 9.0 4320 < th dose dependent rect. 20 5
606 393.76 wind 9.0 4320 < th dose dependent rect. 19 8
652 394.04 radiation 20.0 90 < th dose independent rect. 7 1
661 394.12 wind 1.0 30 > th dose independent rect. 7 1
666 394.14 temperature 20.0 270 < th dose independent sin 4 NA
667 394.14 precipitation 0.1 90 > th dose independent rect. 5 1
670 394.14 precipitation 0.1 90 > th dose dependent rect. 5 1
693 394.28 radiation 1.0 30 > th dose independent rect. 7 1
700 394.32 radiation 30.0 10 < th dose independent rect. 7 1
701 394.33 humidity 70.0 10 > th dose independent rect. 7 1
747 394.44 precipitation 0.1 90 > th dose independent rect. 4 7
756 394.49 wind 5.0 43200 > th dose dependent rect. 19 2
764 394.55 precipitation 0.1 90 > th dose dependent rect. 4 7
775 394.61 temperature 20.0 270 > th dose independent sin 3 NA
783 394.64 radiation 10.0 10 > th dose independent sin 12 NA
785 394.64 atmosphere 1000.0 270 > th dose independent rect. 3 5
834 394.73 wind 9.0 4320 < th dose dependent rect. 20 3
852 394.83 wind 9.0 4320 < th dose dependent rect. 20 1
903 394.91 radiation 40.0 90 < th dose dependent rect. 6 2
914 394.96 atmosphere 995.0 4320 > th dose independent rect. 7 2
921 394.98 precipitation 0.1 10 > th dose independent rect. 4 2
927 394.98 precipitation 0.1 10 > th dose dependent rect. 4 2
974 395.03 temperature 10.0 270 > th dose dependent rect. 22 14
985 395.07 wind 3.0 10 > th dose dependent rect. 5 1