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Os05g0208100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CBL-interacting serine/threonine-protein kinase 15 (EC 2.7.1.37) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.1 | 0.376 | 2.84 | 0.515 | 0.0903 | -1.76 | -0.195 | 17.6 | 0.106 | 5.64 | 31 | 35 | -- | -- |
| 66.25 | 0.382 | 2.89 | 0.0572 | 0.0957 | 0.371 | -0.222 | -- | 0.11 | 5.45 | 31 | 35 | -- | -- |
| 64.11 | 0.373 | 2.84 | 0.516 | 0.097 | -1.8 | -- | 18 | 0.106 | 7.14 | 31.06 | 34 | -- | -- |
| 66.25 | 0.379 | 2.89 | 0.0617 | 0.107 | 0.375 | -- | -- | 0.112 | 7.04 | 31.1 | 15 | -- | -- |
| 64.6 | 0.374 | 2.84 | 0.522 | -- | -1.86 | -- | 18.2 | 0.105 | -- | 31.08 | 32 | -- | -- |
| 67.03 | 0.384 | 2.9 | 0.0642 | 0.0619 | -- | 0.281 | -- | 0.102 | 11.1 | -- | -- | -- | -- |
| 67.17 | 0.384 | 2.89 | 0.0735 | 0.0876 | -- | -- | -- | 0.102 | 8.13 | -- | -- | -- | -- |
| 66.82 | 0.381 | 2.89 | 0.0631 | -- | 0.355 | -- | -- | 0.112 | -- | 31.48 | 15 | -- | -- |
| 66.34 | 0.379 | 2.89 | -- | 0.107 | 0.384 | -- | -- | 0.105 | 6.94 | 31.04 | 15 | -- | -- |
| 67.59 | 0.384 | 2.9 | 0.0742 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 67.31 | 0.384 | 2.9 | -- | 0.088 | -- | -- | -- | 0.0935 | 8.06 | -- | -- | -- | -- |
| 66.92 | 0.381 | 2.9 | -- | -- | 0.362 | -- | -- | 0.105 | -- | 31.45 | 15 | -- | -- |
| 67.74 | 0.384 | 2.9 | -- | -- | -- | -- | -- | 0.0945 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.13 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 3 | 48.54 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 7 | 48.97 | wind | 1 | 10 | < th | dose independent | rect. | 12 | 1 |
| 9 | 48.97 | wind | 1 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 18 | 50.37 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 2 |
| 20 | 50.44 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 10 | 1 |
| 65 | 54.80 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 154 | 57.91 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 157 | 57.93 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 173 | 58.00 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 1 |
| 197 | 58.27 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 1 |
| 341 | 59.37 | temperature | 30 | 90 | > th | dose dependent | sin | 9 | NA |
| 415 | 60.18 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 7 |
| 525 | 61.35 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 8 |
| 528 | 61.36 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 24 | 12 |
| 552 | 61.61 | temperature | 30 | 270 | > th | dose independent | sin | 9 | NA |
| 575 | 61.76 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 2 | 11 |
| 683 | 62.22 | temperature | 30 | 270 | < th | dose independent | sin | 9 | NA |
| 694 | 62.25 | atmosphere | 1000 | 270 | > th | dose independent | sin | 3 | NA |
| 717 | 62.30 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 718 | 62.31 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 14 |
| 727 | 62.33 | humidity | 80 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 780 | 62.37 | radiation | 30 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 804 | 62.38 | radiation | 30 | 10 | > th | dose independent | rect. | 7 | 1 |
| 807 | 62.38 | humidity | 80 | 90 | < th | dose independent | rect. | 5 | 2 |
| 960 | 62.40 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
