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Os05g0206200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.47 (0.025) R2 : 0.591
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.15 (0.0631) R2dC : 0.307 R2C : 0.228
β3 : 1.98 (0.115) R2dE : 0.293 R2E : 0.25
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.26 (0.0541) R2dN8 : 0.0292 R2N8 : 0.0686
σ : 0.466
deviance : 100.18
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C
peak time of C : 3.42
E
wheather : temperature
threshold : 11.03
memory length : 636
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.66 0.437 6.5 -0.749 1.03 2.22 -0.837 -0.207 0.14 3.52 9.678 757 -- --
86.68 0.434 6.49 -0.714 1.01 2.2 -0.859 -- 0.152 3.48 9.147 777 -- --
88.79 0.439 6.5 -0.742 1.05 2.24 -- -0.266 0.143 3.57 9.143 745 -- --
88.86 0.439 6.49 -0.7 1.07 2.25 -- -- 0.151 3.61 9.244 730 -- --
126.43 0.524 6.51 -0.823 -- 2.41 -- -0.192 0.0961 -- 14.2 1043 -- --
150.74 0.576 6.43 -0.153 1.07 -- -0.776 -- 0.493 1.79 -- -- -- --
153.08 0.579 6.43 -0.129 1.07 -- -- -- 0.498 1.72 -- -- -- --
126.53 0.524 6.51 -0.784 -- 2.4 -- -- 0.114 -- 5.661 1040 -- --
100.18 0.466 6.47 -- 1.15 1.98 -- -- 0.26 3.42 11.03 636 -- --
222.11 0.696 6.41 -0.0853 -- -- -- -- 0.522 -- -- -- -- --
153.52 0.58 6.42 -- 1.06 -- -- -- 0.513 1.71 -- -- -- --
140.77 0.553 6.48 -- -- 2.08 -- -- 0.246 -- 7.575 1025 -- --
222.3 0.696 6.41 -- -- -- -- -- 0.532 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 84.45 temperature 10 720 > th dose dependent rect. 7 22
3 84.66 temperature 10 720 > th dose dependent rect. 16 23
16 86.05 temperature 10 720 > th dose dependent rect. 23 23
24 86.31 temperature 10 720 > th dose dependent rect. 14 23
31 86.79 temperature 10 720 > th dose dependent no NA NA
33 86.88 temperature 30 720 < th dose dependent rect. 5 22
35 86.90 temperature 30 720 < th dose dependent rect. 5 20
44 87.08 temperature 15 720 > th dose dependent rect. 12 23
46 87.09 temperature 15 720 > th dose dependent rect. 3 23
49 87.18 temperature 15 720 > th dose dependent rect. 1 23
87 87.91 temperature 10 1440 > th dose dependent rect. 21 2
91 87.97 temperature 10 1440 > th dose dependent rect. 20 4
93 88.02 temperature 30 1440 < th dose dependent rect. 20 4
99 88.08 temperature 30 1440 < th dose dependent rect. 21 2
115 88.20 temperature 30 720 < th dose dependent rect. 12 23
119 88.30 temperature 30 1440 < th dose dependent rect. 18 7
123 88.34 temperature 10 1440 > th dose dependent rect. 18 7
134 88.41 temperature 30 720 < th dose dependent rect. 10 23
162 88.66 temperature 30 720 < th dose dependent no NA NA
179 88.74 temperature 30 720 < th dose dependent rect. 15 23
207 88.91 temperature 10 1440 > th dose dependent sin 13 NA
208 88.91 temperature 10 1440 > th dose dependent rect. 16 13
255 89.11 temperature 10 1440 > th dose dependent rect. 17 17
265 89.14 temperature 30 1440 < th dose dependent rect. 17 17
305 89.29 temperature 30 1440 < th dose dependent sin 13 NA
434 89.64 temperature 10 720 > th dose dependent rect. 12 17
443 89.67 temperature 30 720 < th dose dependent rect. 19 23