Os05g0203000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0203000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.39 | 0.702 | 3.02 | -0.207 | 0.457 | 1.04 | 0.301 | -0.257 | -0.0835 | 12 | 999.9 | 5965 | -- | -- |
| 223.19 | 0.696 | 3.02 | -0.193 | 0.455 | 1.1 | 0.296 | -- | -0.0861 | 12 | 999.4 | 5794 | -- | -- |
| 223.58 | 0.696 | 3.02 | -0.182 | 0.454 | 1.1 | -- | -0.0606 | -0.0862 | 12 | 999.4 | 5796 | -- | -- |
| 223.57 | 0.696 | 3.02 | -0.18 | 0.452 | 1.1 | -- | -- | -0.0846 | 12 | 999.4 | 5799 | -- | -- |
| 236.52 | 0.716 | 3.03 | -0.193 | -- | 1.14 | -- | -0.0714 | -0.0872 | -- | 999.3 | 5772 | -- | -- |
| 242.08 | 0.729 | 3.04 | -0.0962 | 0.469 | -- | 0.277 | -- | -0.165 | 12 | -- | -- | -- | -- |
| 242.41 | 0.729 | 3.04 | -0.0851 | 0.468 | -- | -- | -- | -0.164 | 12 | -- | -- | -- | -- |
| 236.52 | 0.716 | 3.03 | -0.194 | -- | 1.14 | -- | -- | -0.0894 | -- | 999.3 | 5761 | -- | -- |
| 224.39 | 0.698 | 3.02 | -- | 0.455 | 1.1 | -- | -- | -0.0688 | 12.1 | 999.2 | 5793 | -- | -- |
| 256.22 | 0.748 | 3.05 | -0.0997 | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
| 242.6 | 0.729 | 3.04 | -- | 0.47 | -- | -- | -- | -0.154 | 12 | -- | -- | -- | -- |
| 237.47 | 0.718 | 3.03 | -- | -- | 1.15 | -- | -- | -0.0709 | -- | 999.2 | 5761 | -- | -- |
| 256.49 | 0.748 | 3.05 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.83 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 5 | 213.54 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 6 | 213.72 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 6 |
| 22 | 215.09 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 25 | 215.90 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 46 | 217.74 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 50 | 218.17 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 58 | 218.79 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 60 | 218.84 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 62 | 218.92 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 74 | 219.52 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 91 | 219.94 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 93 | 220.13 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 94 | 220.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 95 | 220.20 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 104 | 220.29 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 106 | 220.42 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 108 | 220.48 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 128 | 220.81 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 139 | 220.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 148 | 221.10 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 153 | 221.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 158 | 221.31 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 160 | 221.36 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 176 | 221.50 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 185 | 221.65 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 192 | 221.77 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 196 | 221.82 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 199 | 221.85 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 204 | 221.90 | wind | 7.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 242 | 222.19 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 263 | 222.25 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 0 | NA |
| 266 | 222.28 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 276 | 222.45 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 304 | 222.63 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 323 | 222.71 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 327 | 222.73 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 395 | 222.86 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 399 | 222.87 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 410 | 222.91 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 444 | 223.15 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 489 | 223.36 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 504 | 223.44 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 534 | 223.57 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 11 |
| 539 | 223.60 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 557 | 223.63 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 22 |
| 562 | 223.63 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 567 | 223.64 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 20 |
| 579 | 223.65 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 17 |
| 603 | 223.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 606 | 223.67 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 625 | 223.67 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 698 | 223.78 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 711 | 223.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 715 | 223.83 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 756 | 223.85 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 825 | 223.90 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 891 | 223.98 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 914 | 224.07 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 921 | 224.12 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 922 | 224.13 | temperature | 20.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 953 | 224.23 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 968 | 224.26 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 973 | 224.30 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 982 | 224.32 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 999 | 224.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 1 |