Os05g0202300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0202300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.06 | 0.576 | 9.61 | -0.257 | 4.65 | -1.95 | 1.43 | -3.72 | -0.0105 | 5.07 | 1.141 | 11549 | -- | -- |
| 161.04 | 0.591 | 9.59 | 0.474 | 4.69 | -1.42 | 1.07 | -- | 0.0906 | 5.07 | 2.05 | 13097 | -- | -- |
| 150.87 | 0.572 | 9.59 | -0.147 | 4.23 | -1.93 | -- | -3.44 | 0.0369 | 5.05 | 1.625 | 15052 | -- | -- |
| 161.94 | 0.593 | 9.59 | 0.484 | 4.19 | -1.7 | -- | -- | 0.16 | 5.01 | 2.05 | 15064 | -- | -- |
| 988.86 | 1.46 | 9.54 | 0.0749 | -- | -3.73 | -- | -1.78 | 0.648 | -- | 3.47 | 10745 | -- | -- |
| 213.65 | 0.685 | 9.6 | 0.149 | 4.61 | -- | 1.34 | -- | -0.232 | 5.07 | -- | -- | -- | -- |
| 218.22 | 0.692 | 9.61 | 0.147 | 4.62 | -- | -- | -- | -0.238 | 5.07 | -- | -- | -- | -- |
| 831.71 | 1.34 | 9.64 | 0.169 | -- | -3.63 | -- | -- | 0.743 | -- | 3.082 | 6421 | -- | -- |
| 168.1 | 0.604 | 9.58 | -- | 4.28 | -1.63 | -- | -- | 0.158 | 5 | 2.14 | 15065 | -- | -- |
| 1338.39 | 1.71 | 9.66 | 0.313 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 218.8 | 0.692 | 9.61 | -- | 4.62 | -- | -- | -- | -0.254 | 5.06 | -- | -- | -- | -- |
| 763.14 | 1.29 | 9.63 | -- | -- | -3.55 | -- | -- | 0.551 | -- | 2.091 | 6403 | -- | -- |
| 1340.97 | 1.71 | 9.67 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.84 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 2 | 145.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 3 | 145.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 4 | 146.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 7 | 146.11 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 10 | 146.13 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 22 | 146.14 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 24 | 146.15 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 59 | 146.78 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 118 | 147.26 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 124 | 147.32 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 125 | 147.35 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 135 | 147.52 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 165 | 147.59 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 216 | 147.98 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 272 | 148.36 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 296 | 148.44 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 298 | 148.44 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 299 | 148.46 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 300 | 148.46 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 301 | 148.47 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 306 | 148.51 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 308 | 148.52 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 310 | 148.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 311 | 148.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 20 |
| 312 | 148.53 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 318 | 148.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 335 | 148.56 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 336 | 148.56 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 347 | 148.64 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 348 | 148.64 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 355 | 148.67 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 390 | 148.77 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 418 | 148.85 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 433 | 148.88 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 435 | 148.89 | radiation | 1.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 466 | 148.92 | radiation | 1.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 472 | 148.92 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 483 | 148.94 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 531 | 149.00 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 570 | 149.07 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 595 | 149.10 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 632 | 149.13 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 652 | 149.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 697 | 149.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 703 | 149.23 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 722 | 149.26 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 750 | 149.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 762 | 149.31 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 871 | 149.43 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 923 | 149.48 | radiation | 1.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 951 | 149.50 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 963 | 149.51 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 975 | 149.51 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 977 | 149.52 | radiation | 1.0 | 14400 | < th | dose independent | sin | 5 | NA |