Os05g0200400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os05g0200400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.14 | 0.583 | 8.11 | -2.42 | 2.15 | -0.937 | 1.08 | -1.1 | -1.17 | 5.21 | 62 | 2839 | -- | -- |
| 154.92 | 0.58 | 8.11 | -2.44 | 2.14 | -0.993 | 1.21 | -- | -1.16 | 5.31 | 62.78 | 2656 | -- | -- |
| 156.93 | 0.583 | 8.1 | -2.43 | 2.16 | -0.964 | -- | -1.06 | -1.17 | 5.16 | 61.96 | 2818 | -- | -- |
| 158.13 | 0.586 | 8.12 | -2.43 | 2.15 | -1 | -- | -- | -1.15 | 5.2 | 62.29 | 2691 | -- | -- |
| 396.31 | 0.927 | 8.12 | -2.38 | -- | -1.21 | -- | -1.23 | -1.07 | -- | 61.95 | 2697 | -- | -- |
| 183.35 | 0.635 | 8.18 | -2.32 | 2.2 | -- | 1.17 | -- | -1.45 | 5.12 | -- | -- | -- | -- |
| 186.71 | 0.64 | 8.19 | -2.32 | 2.21 | -- | -- | -- | -1.45 | 5.05 | -- | -- | -- | -- |
| 397.93 | 0.929 | 8.13 | -2.39 | -- | -1.24 | -- | -- | -1.03 | -- | 62.21 | 2678 | -- | -- |
| 225.69 | 0.7 | 8.05 | -- | 2.55 | -1.58 | -- | -- | -1.15 | 4.95 | 63 | 29497 | -- | -- |
| 442.39 | 0.983 | 8.21 | -2.24 | -- | -- | -- | -- | -1.4 | -- | -- | -- | -- | -- |
| 328.63 | 0.848 | 8.13 | -- | 2.17 | -- | -- | -- | -1.2 | 5.08 | -- | -- | -- | -- |
| 446.27 | 0.984 | 8.11 | -- | -- | -2.01 | -- | -- | -0.987 | -- | 63 | 28578 | -- | -- |
| 574.86 | 1.12 | 8.15 | -- | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 2 | 140.62 | wind | 9 | 43200 | > th | dose dependent | sin | 15 | NA |
| 4 | 140.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 27 | 142.51 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 32 | 142.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 15 |
| 33 | 142.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 37 | 142.74 | wind | 9 | 43200 | > th | dose independent | sin | 15 | NA |
| 38 | 142.74 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 41 | 142.78 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 62 | 143.12 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 12 |
| 64 | 143.13 | wind | 9 | 43200 | < th | dose independent | sin | 15 | NA |
| 102 | 143.37 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 105 | 143.39 | wind | 9 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 118 | 143.45 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 124 | 143.50 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 147 | 143.59 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 152 | 143.62 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 172 | 143.69 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 176 | 143.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 184 | 143.73 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 240 | 143.93 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 245 | 143.95 | wind | 9 | 43200 | > th | dose independent | rect. | 12 | 13 |
| 247 | 143.95 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 258 | 143.99 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 265 | 144.01 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 304 | 144.14 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 309 | 144.17 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 310 | 144.17 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 350 | 144.30 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 365 | 144.35 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 397 | 144.44 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 410 | 144.47 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 423 | 144.52 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 424 | 144.52 | wind | 7 | 43200 | > th | dose dependent | no | NA | NA |
| 425 | 144.53 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 495 | 144.72 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 526 | 144.78 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 540 | 144.81 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 563 | 144.84 | wind | 3 | 43200 | > th | dose dependent | rect. | 1 | 17 |
| 575 | 144.87 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 618 | 144.94 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 619 | 144.95 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 627 | 144.95 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 629 | 144.96 | wind | 7 | 43200 | > th | dose independent | sin | 0 | NA |
| 655 | 145.01 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 672 | 145.05 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 760 | 145.23 | wind | 7 | 43200 | < th | dose independent | sin | 0 | NA |
| 783 | 145.26 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 15 |
| 819 | 145.32 | wind | 3 | 43200 | > th | dose dependent | rect. | 15 | 19 |
| 888 | 145.50 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 912 | 145.54 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 21 |
| 934 | 145.60 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 22 |
| 969 | 145.70 | wind | 3 | 43200 | > th | dose dependent | rect. | 24 | 22 |