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Os05g0199700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0264) R2 : 0.638
β1 : -2.28 (0.0966) R2dD : 0.46 R2D : 0.343
β2 : 0.944 (0.066) R2dC : 0.164 R2C : 0.138
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.595 (0.0563) R2dN8 : 0.119 R2N8 : 0.0148
σ : 0.496
deviance : 112.21
__
_____
C
peak time of C : 20.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.08 0.458 12.4 -2.22 0.662 0.779 -0.508 0.288 -0.541 16.3 0.08414 6 -- --
95.4 0.455 12.4 -2.21 0.661 0.778 -0.665 -- -0.539 16.2 0.1128 4 -- --
95.55 0.455 12.4 -2.24 0.66 0.779 -- 0.412 -0.541 16.3 0.01057 4 -- --
96.11 0.457 12.4 -2.22 0.65 0.785 -- -- -0.529 16.2 9.407e-06 3 -- --
115.7 0.504 12.4 -2.26 -- 0.637 -- 0.406 -0.565 -- 0.01057 4 -- --
112.06 0.496 12.5 -2.28 0.943 -- 0.22 -- -0.595 20.7 -- -- -- --
112.21 0.496 12.5 -2.28 0.944 -- -- -- -0.595 20.7 -- -- -- --
116.45 0.503 12.4 -2.26 -- 0.643 -- -- -0.569 -- 0.12 3 -- --
226.51 0.705 12.4 -- 0.724 0.891 -- -- -0.279 15.6 9.407e-06 3 -- --
162.59 0.596 12.4 -2.29 -- -- -- -- -0.602 -- -- -- -- --
249.65 0.739 12.4 -- 0.951 -- -- -- -0.34 20.5 -- -- -- --
250.13 0.739 12.4 -- -- 0.667 -- -- -0.308 -- 0.05335 3 -- --
300.37 0.809 12.4 -- -- -- -- -- -0.349 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.56 humidity 50.0 270 > th dose independent rect. 6 20
2 88.68 wind 1.0 90 > th dose independent rect. 7 21
3 88.85 radiation 10.0 270 < th dose dependent rect. 2 4
4 88.94 radiation 10.0 270 < th dose independent rect. 2 4
5 88.95 radiation 20.0 90 < th dose independent rect. 4 3
7 89.09 humidity 80.0 90 > th dose independent rect. 4 3
11 89.13 wind 9.0 90 < th dose independent rect. 4 3
12 89.13 temperature 10.0 90 > th dose independent rect. 4 3
14 89.13 temperature 30.0 90 < th dose independent rect. 4 3
15 89.13 humidity 50.0 90 > th dose independent rect. 4 3
17 89.13 atmosphere 995.0 90 > th dose independent rect. 4 3
18 89.13 atmosphere 1015.0 90 < th dose independent rect. 4 3
20 89.13 temperature 10.0 90 > th dose independent rect. 7 21
25 89.20 atmosphere 1010.0 270 < th dose independent rect. 2 4
26 89.21 radiation 40.0 90 < th dose dependent rect. 4 3
27 89.24 precipitation 0.1 90 < th dose independent rect. 4 3
28 89.24 precipitation 0.1 90 < th dose dependent rect. 4 3
30 89.33 wind 9.0 270 < th dose independent rect. 2 4
31 89.33 temperature 10.0 270 > th dose independent rect. 2 4
33 89.33 temperature 30.0 270 < th dose independent rect. 2 4
34 89.33 humidity 50.0 270 > th dose independent rect. 2 4
37 89.33 atmosphere 995.0 270 > th dose independent rect. 2 4
65 89.47 temperature 10.0 270 > th dose independent rect. 5 22
66 89.47 humidity 50.0 270 > th dose dependent rect. 2 4
68 89.50 humidity 50.0 90 > th dose dependent rect. 4 3
69 89.51 wind 9.0 90 < th dose independent rect. 7 21
77 89.59 radiation 10.0 270 < th dose independent rect. 1 6
78 89.61 temperature 10.0 270 > th dose dependent rect. 3 3
90 89.82 precipitation 0.1 270 < th dose independent rect. 6 20
92 89.82 precipitation 0.1 270 < th dose dependent rect. 6 20
93 89.84 atmosphere 995.0 90 > th dose independent rect. 7 21
95 89.86 atmosphere 1015.0 90 < th dose independent rect. 7 21
98 89.93 precipitation 0.1 270 < th dose independent rect. 2 4
100 89.93 precipitation 0.1 270 < th dose dependent rect. 2 4
113 90.15 wind 9.0 270 < th dose independent rect. 5 22
139 90.38 humidity 50.0 270 > th dose dependent rect. 1 6
143 90.41 wind 9.0 90 < th dose dependent rect. 4 3
165 90.49 precipitation 0.1 270 < th dose independent rect. 5 22
166 90.49 precipitation 0.1 270 < th dose dependent rect. 5 22
187 90.65 wind 9.0 270 < th dose independent rect. 7 18
228 91.03 wind 1.0 90 > th dose independent rect. 4 3
259 91.23 wind 1.0 270 > th dose independent rect. 7 18
264 91.28 radiation 1.0 10 < th dose dependent sin 12 NA
271 91.31 wind 1.0 90 > th dose independent rect. 7 8
284 91.46 temperature 30.0 270 < th dose independent rect. 6 20
293 91.51 atmosphere 995.0 90 > th dose dependent rect. 4 3
303 91.62 temperature 10.0 270 > th dose dependent rect. 1 6
310 91.73 wind 1.0 270 > th dose independent rect. 2 4
342 91.88 wind 9.0 1440 < th dose independent rect. 5 3
343 91.88 temperature 10.0 1440 > th dose independent rect. 5 3
346 91.88 temperature 30.0 1440 < th dose independent rect. 5 3
350 91.88 humidity 50.0 1440 > th dose independent rect. 5 3
355 91.88 atmosphere 995.0 1440 > th dose independent rect. 5 3
356 91.88 atmosphere 1015.0 1440 < th dose independent rect. 5 3
358 91.88 temperature 10.0 1440 > th dose independent rect. 8 21
393 92.14 humidity 70.0 90 > th dose independent rect. 18 10
406 92.25 atmosphere 1015.0 90 < th dose dependent rect. 4 3
407 92.27 radiation 40.0 270 < th dose dependent rect. 15 11
444 92.51 wind 7.0 270 < th dose independent rect. 17 9
457 92.58 radiation 40.0 90 < th dose independent rect. 13 18
465 92.62 humidity 50.0 270 > th dose independent rect. 15 11
482 92.76 radiation 10.0 270 < th dose independent rect. 17 9
497 92.84 precipitation 0.1 270 < th dose independent rect. 21 14
499 92.84 precipitation 0.1 270 < th dose dependent rect. 21 14
512 92.91 humidity 50.0 270 > th dose independent rect. 6 7
521 92.95 temperature 15.0 270 > th dose independent rect. 6 6
529 93.00 precipitation 0.1 90 < th dose independent rect. 7 8
531 93.00 precipitation 0.1 90 < th dose dependent rect. 7 8
533 93.03 radiation 40.0 90 < th dose independent rect. 15 16
547 93.05 precipitation 0.1 270 < th dose independent rect. 6 6
549 93.05 precipitation 0.1 270 < th dose dependent rect. 6 6
551 93.06 atmosphere 995.0 90 > th dose independent rect. 7 8
559 93.08 wind 9.0 270 < th dose dependent rect. 1 6
562 93.10 temperature 10.0 90 > th dose independent rect. 7 8
563 93.10 atmosphere 1015.0 90 < th dose independent rect. 7 8
564 93.10 temperature 10.0 270 > th dose independent rect. 17 9
568 93.10 temperature 10.0 270 > th dose independent rect. 2 15
569 93.10 atmosphere 1015.0 270 < th dose independent rect. 2 15
570 93.10 temperature 10.0 90 > th dose independent rect. 15 16
574 93.12 precipitation 0.1 270 < th dose independent rect. 17 9
575 93.12 precipitation 0.1 270 < th dose dependent rect. 17 9
576 93.13 radiation 1.0 90 > th dose independent rect. 7 8
581 93.14 atmosphere 995.0 270 > th dose independent rect. 6 6
582 93.14 atmosphere 1015.0 270 < th dose independent rect. 6 6
584 93.14 temperature 10.0 270 > th dose independent rect. 12 18
597 93.18 wind 9.0 90 < th dose independent rect. 15 16
600 93.19 wind 9.0 270 < th dose independent rect. 6 6
629 93.25 wind 9.0 270 < th dose independent rect. 2 15
634 93.27 wind 9.0 270 < th dose independent rect. 12 18
648 93.30 atmosphere 995.0 270 > th dose dependent rect. 2 4
651 93.31 humidity 50.0 270 > th dose independent rect. 21 14
655 93.33 wind 7.0 270 < th dose independent rect. 21 14
679 93.42 precipitation 0.1 90 < th dose independent rect. 15 16
680 93.42 precipitation 0.1 90 < th dose dependent rect. 15 16
682 93.44 radiation 1.0 270 > th dose independent rect. 6 6
689 93.45 temperature 10.0 270 > th dose independent rect. 11 10
690 93.45 temperature 10.0 270 > th dose independent rect. 21 14
691 93.45 atmosphere 995.0 270 > th dose independent rect. 21 14
758 93.67 precipitation 0.1 270 < th dose independent rect. 11 10
761 93.67 precipitation 0.1 270 < th dose dependent rect. 11 10
766 93.68 radiation 1.0 30 > th dose independent rect. 12 19
767 93.69 precipitation 0.1 270 < th dose independent rect. 2 15
770 93.69 precipitation 0.1 270 < th dose dependent rect. 2 15
782 93.75 temperature 30.0 90 < th dose independent rect. 18 10
793 93.79 wind 9.0 270 < th dose independent rect. 11 10
796 93.79 temperature 10.0 270 > th dose dependent rect. 18 8
807 93.84 precipitation 0.1 270 < th dose independent rect. 12 18
808 93.84 precipitation 0.1 270 < th dose dependent rect. 12 18
812 93.87 temperature 30.0 90 < th dose dependent rect. 4 3
820 93.92 radiation 1.0 30 < th dose independent sin 13 NA
828 93.94 radiation 1.0 270 > th dose independent rect. 7 4
829 93.94 atmosphere 995.0 270 > th dose independent rect. 12 18
844 93.99 temperature 15.0 270 > th dose independent rect. 7 4
857 94.02 temperature 10.0 90 > th dose dependent rect. 21 7
860 94.04 atmosphere 1015.0 270 < th dose dependent rect. 2 4
876 94.11 atmosphere 995.0 270 > th dose independent rect. 17 9
878 94.12 humidity 50.0 270 > th dose independent rect. 7 4
885 94.13 atmosphere 995.0 270 > th dose independent rect. 2 15
891 94.15 precipitation 0.1 270 < th dose independent rect. 7 4
892 94.15 precipitation 0.1 270 < th dose dependent rect. 7 4
896 94.17 radiation 1.0 30 < th dose independent rect. 18 10
932 94.22 radiation 1.0 270 < th dose independent sin 4 NA
944 94.23 wind 9.0 270 < th dose independent rect. 7 4
948 94.24 atmosphere 995.0 270 > th dose independent rect. 7 4
949 94.24 atmosphere 1015.0 270 < th dose independent rect. 7 4
951 94.24 temperature 10.0 270 > th dose independent rect. 11 20
961 94.27 radiation 1.0 30 > th dose independent rect. 15 16
977 94.31 atmosphere 995.0 90 > th dose independent rect. 15 16