Os05g0199500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os05g0199500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.14 | 0.415 | 5.95 | 0.166 | 0.427 | -2.17 | -0.203 | -3.19 | 0.00519 | 14.3 | 19.85 | 4573 | -- | -- |
| 83.12 | 0.425 | 6 | 0.293 | 0.454 | -1.72 | -0.308 | -- | 0.0932 | 14.4 | 15.19 | 3901 | -- | -- |
| 78.16 | 0.412 | 5.94 | 0.148 | 0.444 | -2.38 | -- | -3.58 | 0.0248 | 14.2 | 19.38 | 4567 | -- | -- |
| 83.42 | 0.425 | 6 | 0.33 | 0.44 | -1.49 | -- | -- | 0.0928 | 14.1 | 15.23 | 3897 | -- | -- |
| 88.89 | 0.439 | 5.93 | 0.126 | -- | -2.76 | -- | -4.35 | 0.00524 | -- | 19.05 | 4580 | -- | -- |
| 90.78 | 0.447 | 5.99 | 0.568 | 0.415 | -- | -0.188 | -- | 0.153 | 14.3 | -- | -- | -- | -- |
| 90.91 | 0.447 | 5.99 | 0.562 | 0.414 | -- | -- | -- | 0.152 | 14.2 | -- | -- | -- | -- |
| 94.68 | 0.453 | 6.01 | 0.336 | -- | -1.32 | -- | -- | 0.0866 | -- | 14.94 | 3391 | -- | -- |
| 80.76 | 0.419 | 6.04 | -- | 0.453 | -0.929 | -- | -- | -0.0887 | 14.2 | 25.1 | 4884 | -- | -- |
| 101.13 | 0.47 | 5.99 | 0.545 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 99.25 | 0.466 | 6 | -- | 0.403 | -- | -- | -- | 0.089 | 14.1 | -- | -- | -- | -- |
| 91.36 | 0.445 | 6.05 | -- | -- | -0.941 | -- | -- | -0.0989 | -- | 24.11 | 6083 | -- | -- |
| 108.97 | 0.487 | 6.01 | -- | -- | -- | -- | -- | 0.0812 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.41 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 22 |
| 3 | 75.50 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 22 |
| 7 | 75.73 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 20 | 75.96 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 29 | 76.11 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 30 | 76.12 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 42 | 76.20 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 45 | 76.24 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 49 | 76.26 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 58 | 76.34 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 66 | 76.41 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 73 | 76.45 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 78 | 76.49 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 23 | 7 |
| 102 | 76.71 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 111 | 76.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 112 | 76.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 115 | 76.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 117 | 76.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 121 | 76.86 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 123 | 76.90 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 135 | 77.00 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 137 | 77.02 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 147 | 77.08 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 16 |
| 170 | 77.23 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 173 | 77.25 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 177 | 77.26 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 195 | 77.27 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 198 | 77.27 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 199 | 77.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 210 | 77.33 | wind | 5.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 211 | 77.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 217 | 77.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 241 | 77.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 242 | 77.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 243 | 77.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 244 | 77.46 | wind | 5.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 314 | 77.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 323 | 77.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 325 | 77.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 427 | 77.81 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 2 | 14 |
| 496 | 77.88 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 524 | 77.91 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 534 | 77.91 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 555 | 77.94 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 663 | 78.02 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 689 | 78.04 | wind | 5.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 730 | 78.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 747 | 78.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 759 | 78.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 760 | 78.09 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 776 | 78.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 810 | 78.13 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 9 | NA |
| 811 | 78.13 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 9 | NA |
| 816 | 78.13 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 9 | NA |
| 832 | 78.14 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 843 | 78.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 877 | 78.17 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 888 | 78.18 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 937 | 78.21 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 9 | NA |
| 958 | 78.23 | wind | 5.0 | 43200 | < th | dose independent | rect. | 10 | 1 |