Os05g0198100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os05g0198100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.4 | 0.323 | 2.77 | 0.219 | 0.0664 | -0.279 | -0.163 | 3.97 | 0.0418 | 2.1 | 31.03 | 11 | -- | -- |
| 48.26 | 0.324 | 2.8 | -0.000965 | 0.07 | 0.147 | -0.186 | -- | 0.0438 | 2.48 | 31.01 | 8 | -- | -- |
| 47.48 | 0.321 | 2.77 | 0.228 | 0.0717 | -0.279 | -- | 4.07 | 0.043 | 3.07 | 31 | 11 | -- | -- |
| 48.35 | 0.324 | 2.8 | -0.00111 | 0.0734 | 0.162 | -- | -- | 0.0452 | 2.95 | 31 | 11 | -- | -- |
| 47.75 | 0.322 | 2.77 | 0.231 | -- | -0.307 | -- | 4.04 | 0.0429 | -- | 31 | 11 | -- | -- |
| 48.71 | 0.327 | 2.8 | 0.00549 | 0.0404 | -- | -0.233 | -- | 0.0345 | 1.08 | -- | -- | -- | -- |
| 48.93 | 0.328 | 2.8 | 0.0135 | 0.0445 | -- | -- | -- | 0.0355 | 2.49 | -- | -- | -- | -- |
| 48.64 | 0.325 | 2.8 | 0.00464 | -- | 0.132 | -- | -- | 0.0452 | -- | 31.01 | 11 | -- | -- |
| 48.35 | 0.324 | 2.8 | -- | 0.0736 | 0.162 | -- | -- | 0.0455 | 2.95 | 31 | 11 | -- | -- |
| 49.04 | 0.327 | 2.8 | 0.0154 | -- | -- | -- | -- | 0.0366 | -- | -- | -- | -- | -- |
| 48.93 | 0.327 | 2.8 | -- | 0.0447 | -- | -- | -- | 0.034 | 2.49 | -- | -- | -- | -- |
| 48.64 | 0.325 | 2.8 | -- | -- | 0.131 | -- | -- | 0.0449 | -- | 31 | 11 | -- | -- |
| 49.05 | 0.327 | 2.8 | -- | -- | -- | -- | -- | 0.0349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.03 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 31 | 33.13 | temperature | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 217 | 39.20 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 219 | 39.21 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 269 | 41.47 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 270 | 41.50 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 336 | 42.30 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 337 | 42.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 340 | 42.30 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 344 | 42.30 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 354 | 42.30 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 355 | 42.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 375 | 42.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 378 | 42.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 384 | 42.33 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 386 | 42.33 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 389 | 42.35 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 390 | 42.35 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 392 | 42.36 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 393 | 42.36 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 409 | 42.38 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 410 | 42.38 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 411 | 42.39 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 413 | 42.40 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 416 | 42.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 419 | 42.40 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 420 | 42.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 424 | 42.40 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 426 | 42.40 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 431 | 42.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 432 | 42.40 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 437 | 42.41 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 440 | 42.44 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 444 | 42.48 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 447 | 42.51 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 450 | 42.63 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 453 | 42.71 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 463 | 42.89 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 484 | 43.18 | temperature | 30.0 | 30 | > th | dose independent | sin | 8 | NA |
| 535 | 43.78 | temperature | 30.0 | 90 | < th | dose independent | sin | 9 | NA |
| 572 | 44.17 | humidity | 70.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 640 | 44.82 | temperature | 30.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 897 | 45.88 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 935 | 45.96 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 22 | 12 |