Os05g0196400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0196400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.65 | 0.565 | 7.54 | -0.314 | 1.45 | -1.81 | -1.15 | -1.43 | 0.479 | 14.2 | 4.217 | 109 | 3.05 | 3.83 |
| 146.89 | 0.564 | 7.54 | -0.254 | 1.41 | -1.89 | -1.09 | -- | 0.466 | 14.2 | 4.061 | 109 | 3.08 | 3.77 |
| 148.94 | 0.568 | 7.53 | -0.313 | 1.46 | -1.82 | -- | -0.899 | 0.491 | 14.2 | 4.072 | 109 | 3.1 | 3.78 |
| 148.54 | 0.568 | 7.53 | -0.246 | 1.46 | -2 | -- | -- | 0.487 | 14.2 | 3.843 | 118 | 3.27 | 3.5 |
| 252.98 | 0.741 | 7.55 | -0.258 | -- | -2.32 | -- | -0.652 | 0.49 | -- | 5.425 | 73 | 3.12 | 4.12 |
| 215.5 | 0.688 | 7.55 | -0.377 | 2.23 | -- | -0.24 | -- | 0.465 | 15.6 | -- | -- | -- | -- |
| 215.68 | 0.688 | 7.56 | -0.381 | 2.23 | -- | -- | -- | 0.464 | 15.6 | -- | -- | -- | -- |
| 248.69 | 0.734 | 7.53 | -0.246 | -- | -2.26 | -- | -- | 0.49 | -- | 9.887 | 125 | 2.47 | 4.03 |
| 149.88 | 0.57 | 7.53 | -- | 1.52 | -2.05 | -- | -- | 0.51 | 14.4 | 3.733 | 119 | 3.35 | 3.22 |
| 491.47 | 1.04 | 7.55 | -0.475 | -- | -- | -- | -- | 0.405 | -- | -- | -- | -- | -- |
| 219.51 | 0.693 | 7.55 | -- | 2.23 | -- | -- | -- | 0.506 | 15.6 | -- | -- | -- | -- |
| 248.79 | 0.735 | 7.53 | -- | -- | -2.45 | -- | -- | 0.514 | -- | 5.797 | 121 | 2.49 | 4.03 |
| 497.41 | 1.04 | 7.54 | -- | -- | -- | -- | -- | 0.457 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.48 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 5 | 151.27 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 151.87 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 10 | 152.81 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 13 | 153.52 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 19 | 153.82 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 23 | 154.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 24 | 154.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 25 | 154.38 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 26 | 154.38 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 30 | 154.56 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 33 | 154.97 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 49 | 156.09 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 52 | 156.57 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 56 | 156.82 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 57 | 156.88 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 59 | 156.91 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 62 | 156.91 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 64 | 156.91 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 68 | 156.91 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 72 | 157.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 75 | 157.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 78 | 157.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 80 | 157.02 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 85 | 157.25 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 89 | 157.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 91 | 157.55 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 110 | 157.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 111 | 157.86 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 115 | 157.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 131 | 158.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 136 | 158.60 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 139 | 158.68 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 140 | 158.71 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 154 | 159.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 163 | 159.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 166 | 159.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 168 | 159.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 171 | 159.90 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 206 | 160.53 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 358 | 162.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 359 | 162.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 402 | 163.37 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 453 | 164.20 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 472 | 164.32 | radiation | 40.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 529 | 164.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 14 |
| 530 | 164.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 548 | 165.14 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 563 | 165.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 615 | 165.73 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 703 | 166.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 727 | 166.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 729 | 166.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 731 | 166.95 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 735 | 167.01 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 739 | 167.03 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 745 | 167.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 838 | 167.98 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 848 | 168.09 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 866 | 168.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 897 | 168.44 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 915 | 168.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 946 | 168.79 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 964 | 168.91 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 990 | 169.00 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 999 | 169.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 7 |