Os05g0194500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os05g0194500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.64 | 0.619 | 5.85 | 1.17 | 0.812 | -0.682 | -0.416 | 2.98 | 0.227 | 10.4 | 20.19 | 3952 | -- | -- |
| 184.12 | 0.632 | 5.94 | 0.877 | 0.967 | -1.22 | -0.874 | -- | 0.237 | 10.2 | 19.4 | 10053 | -- | -- |
| 174.32 | 0.615 | 5.85 | 1.16 | 0.811 | -0.669 | -- | 3.04 | 0.227 | 10.5 | 20.16 | 3905 | -- | -- |
| 175.46 | 0.617 | 5.93 | 1.48 | 0.832 | -1.74 | -- | -- | 0.178 | 10.6 | 17.04 | 23682 | -- | -- |
| 214.02 | 0.681 | 5.87 | 1.15 | -- | -0.828 | -- | 2.77 | 0.246 | -- | 20.1 | 3749 | -- | -- |
| 212.16 | 0.683 | 6.04 | -0.018 | 0.836 | -- | -0.504 | -- | -0.213 | 10.6 | -- | -- | -- | -- |
| 213.2 | 0.684 | 6.04 | -0.0381 | 0.838 | -- | -- | -- | -0.215 | 10.6 | -- | -- | -- | -- |
| 215.35 | 0.683 | 5.96 | 1.35 | -- | -1.71 | -- | -- | 0.209 | -- | 17.3 | 22503 | -- | -- |
| 193.59 | 0.648 | 6.02 | -- | 0.828 | -1.02 | -- | -- | -0.107 | 10.5 | 17.03 | 9875 | -- | -- |
| 256.49 | 0.748 | 6.06 | -0.0539 | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
| 213.24 | 0.683 | 6.04 | -- | 0.838 | -- | -- | -- | -0.211 | 10.6 | -- | -- | -- | -- |
| 234.24 | 0.713 | 6.04 | -- | -- | -0.991 | -- | -- | -0.128 | -- | 13.9 | 26818 | -- | -- |
| 256.57 | 0.748 | 6.06 | -- | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.23 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 2 | 170.58 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 3 | 170.58 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 16 |
| 4 | 170.68 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 7 | 170.73 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 14 | 171.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 19 | 171.17 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 20 | 171.18 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 21 | 171.20 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 26 | 171.34 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 27 | 171.44 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 29 | 171.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 32 | 171.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 40 | 171.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 46 | 172.01 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 47 | 172.02 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 54 | 172.14 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 59 | 172.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 61 | 172.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 66 | 172.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 9 |
| 67 | 172.25 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 70 | 172.28 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 79 | 172.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 81 | 172.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 86 | 172.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 93 | 172.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 95 | 172.50 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 98 | 172.50 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 100 | 172.51 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 108 | 172.56 | wind | 9.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 111 | 172.56 | wind | 9.0 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 115 | 172.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 23 | 20 |
| 129 | 172.63 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 130 | 172.63 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 20 |
| 133 | 172.64 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 14 |
| 134 | 172.65 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 135 | 172.66 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 136 | 172.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 16 |
| 137 | 172.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 6 | 18 |
| 142 | 172.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 147 | 172.69 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 157 | 172.73 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 161 | 172.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 167 | 172.75 | wind | 9.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 170 | 172.76 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 171 | 172.76 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 16 |
| 173 | 172.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 183 | 172.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 184 | 172.78 | wind | 9.0 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 185 | 172.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 191 | 172.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 6 | 16 |
| 205 | 172.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 224 | 172.85 | wind | 9.0 | 43200 | > th | dose independent | no | NA | NA |
| 232 | 172.86 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 20 |
| 264 | 172.93 | wind | 9.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 270 | 172.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 274 | 172.94 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 276 | 172.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 279 | 172.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 280 | 172.95 | atmosphere | 995.0 | 43200 | < th | dose dependent | no | NA | NA |
| 283 | 172.95 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 346 | 173.05 | wind | 7.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 357 | 173.07 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 358 | 173.07 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 21 |
| 363 | 173.09 | temperature | 20.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 369 | 173.09 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 374 | 173.10 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 20 |
| 377 | 173.11 | wind | 9.0 | 43200 | < th | dose independent | rect. | 6 | 18 |
| 400 | 173.14 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 415 | 173.17 | wind | 9.0 | 43200 | < th | dose independent | rect. | 6 | 21 |
| 438 | 173.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 439 | 173.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 459 | 173.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 474 | 173.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 475 | 173.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 480 | 173.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 482 | 173.28 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 6 | 18 |
| 485 | 173.29 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 505 | 173.32 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 6 | 21 |
| 507 | 173.33 | wind | 9.0 | 43200 | < th | dose independent | no | NA | NA |
| 544 | 173.37 | wind | 9.0 | 43200 | < th | dose independent | rect. | 6 | 16 |
| 571 | 173.39 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 602 | 173.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 627 | 173.46 | temperature | 20.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 636 | 173.47 | wind | 7.0 | 43200 | > th | dose dependent | no | NA | NA |
| 679 | 173.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 698 | 173.55 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 736 | 173.61 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 739 | 173.61 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 23 |
| 740 | 173.62 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 754 | 173.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 847 | 173.85 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 873 | 173.91 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 907 | 173.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 913 | 173.97 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 916 | 173.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 927 | 173.99 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 934 | 174.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 952 | 174.02 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 22 | 9 |