Os05g0193800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0193800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.05 | 0.477 | 8.44 | -1.03 | 0.36 | -1.21 | 0.0193 | -0.811 | -0.511 | 3.81 | 24.8 | 267 | 0.984 | 5.99 |
| 104.42 | 0.476 | 8.44 | -0.995 | 0.351 | -1.24 | -0.112 | -- | -0.502 | 3.89 | 24.8 | 268 | 1.03 | 5.97 |
| 102.94 | 0.473 | 8.45 | -1.01 | 0.339 | -1.21 | -- | -0.74 | -0.517 | 3.69 | 24.69 | 271 | 0.982 | 6 |
| 104.5 | 0.476 | 8.44 | -1.01 | 0.34 | -1.23 | -- | -- | -0.519 | 3.8 | 24.66 | 274 | 0.933 | 5.95 |
| 106.65 | 0.481 | 8.45 | -1.01 | -- | -1.02 | -- | -0.726 | -0.512 | -- | 24.6 | 272 | 1.13 | 5.92 |
| 135.83 | 0.546 | 8.44 | -1.02 | 0.572 | -- | 0.3 | -- | -0.401 | 19 | -- | -- | -- | -- |
| 136.05 | 0.546 | 8.44 | -1.02 | 0.573 | -- | -- | -- | -0.4 | 19.1 | -- | -- | -- | -- |
| 107.74 | 0.483 | 8.44 | -1 | -- | -1.07 | -- | -- | -0.505 | -- | 24.55 | 251 | 1.57 | 5.45 |
| 131.99 | 0.535 | 8.45 | -- | 0.325 | -1.23 | -- | -- | -0.449 | 3.8 | 24.7 | 265 | 0.933 | 6 |
| 153.35 | 0.579 | 8.42 | -1.03 | -- | -- | -- | -- | -0.411 | -- | -- | -- | -- | -- |
| 163.55 | 0.598 | 8.41 | -- | 0.584 | -- | -- | -- | -0.287 | 19 | -- | -- | -- | -- |
| 134.25 | 0.54 | 8.43 | -- | -- | -1.06 | -- | -- | -0.411 | -- | 24.5 | 231 | 1.7 | 5.47 |
| 181.46 | 0.629 | 8.4 | -- | -- | -- | -- | -- | -0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.31 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 4 | 106.36 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 10 | 108.21 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 18 | 109.88 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 32 | 111.20 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 36 | 111.81 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 41 | 112.21 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 45 | 112.66 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 47 | 112.77 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 48 | 112.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 53 | 113.09 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 63 | 113.39 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 64 | 113.42 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 13 |
| 66 | 113.49 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 67 | 113.49 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 76 | 113.71 | temperature | 25.0 | 270 | < th | dose independent | sin | 8 | NA |
| 79 | 113.74 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 82 | 113.84 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 83 | 113.85 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 97 | 114.03 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 115 | 114.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 119 | 114.18 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 19 | 9 |
| 124 | 114.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 125 | 114.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 133 | 114.32 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 139 | 114.38 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 150 | 114.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 151 | 114.49 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 160 | 114.59 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 166 | 114.66 | temperature | 25.0 | 270 | > th | dose independent | sin | 8 | NA |
| 167 | 114.66 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 180 | 114.76 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 15 |
| 189 | 114.83 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 190 | 114.83 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 191 | 114.83 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 193 | 114.86 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 207 | 115.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 210 | 115.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 215 | 115.07 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 224 | 115.11 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 231 | 115.16 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 239 | 115.23 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 240 | 115.25 | radiation | 1.0 | 10 | < th | dose independent | sin | 11 | NA |
| 241 | 115.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 242 | 115.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 245 | 115.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 248 | 115.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 249 | 115.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 250 | 115.27 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 253 | 115.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 256 | 115.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 258 | 115.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 283 | 115.36 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 289 | 115.40 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 290 | 115.40 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 300 | 115.46 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 301 | 115.46 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 302 | 115.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 303 | 115.46 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 305 | 115.46 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 306 | 115.46 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 311 | 115.46 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 312 | 115.46 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 314 | 115.46 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 324 | 115.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 326 | 115.49 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 328 | 115.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 332 | 115.52 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 333 | 115.52 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 337 | 115.55 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 339 | 115.56 | wind | 9.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 342 | 115.57 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 355 | 115.63 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 364 | 115.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 373 | 115.69 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 19 | 22 |
| 386 | 115.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 396 | 115.79 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 405 | 115.81 | radiation | 1.0 | 10 | > th | dose independent | sin | 11 | NA |
| 427 | 115.82 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 436 | 115.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 439 | 115.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 440 | 115.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 474 | 115.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 509 | 116.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 533 | 116.17 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 547 | 116.21 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 566 | 116.31 | humidity | 90.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 690 | 116.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 694 | 116.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 697 | 116.59 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 699 | 116.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 9 |
| 700 | 116.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 714 | 116.64 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 743 | 116.68 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 757 | 116.72 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 785 | 116.76 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 824 | 116.88 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 825 | 116.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 842 | 116.92 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 861 | 116.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 884 | 116.99 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 885 | 116.99 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 896 | 117.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 899 | 117.02 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 19 | 19 |
| 901 | 117.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 909 | 117.04 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 928 | 117.08 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 932 | 117.08 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 937 | 117.09 | radiation | 1.0 | 10 | < th | dose independent | rect. | 19 | 22 |
| 938 | 117.10 | humidity | 70.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 948 | 117.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 950 | 117.11 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 957 | 117.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 958 | 117.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 960 | 117.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 961 | 117.12 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 963 | 117.12 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 992 | 117.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 993 | 117.15 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 1000 | 117.15 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |