Os05g0193700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0193700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.63 | 0.553 | 7.76 | 2.41 | 1.8 | -1.35 | 0.241 | 2.15 | 0.644 | 19.8 | 21.4 | 611 | 0.263 | -- |
| 147.45 | 0.566 | 7.7 | 2.63 | 1.77 | -1.6 | -0.811 | -- | 0.715 | 19.7 | 21.2 | 630 | 0.000181 | -- |
| 137.24 | 0.546 | 7.76 | 2.41 | 1.78 | -1.32 | -- | 2.1 | 0.634 | 19.8 | 21.72 | 609 | 0.000244 | -- |
| 149.66 | 0.57 | 7.69 | 2.76 | 1.79 | -1.51 | -- | -- | 0.776 | 19.7 | 21.2 | 612 | 9.31e-05 | -- |
| 190.13 | 0.642 | 7.6 | 3.13 | -- | -2.18 | -- | 1.58 | 1.08 | -- | 30.6 | 389 | 0.722 | -- |
| 193.09 | 0.651 | 7.66 | 3.14 | 2.14 | -- | -1.4 | -- | 1.04 | 20.3 | -- | -- | -- | -- |
| 199.18 | 0.661 | 7.66 | 3.19 | 2.15 | -- | -- | -- | 1.04 | 20.3 | -- | -- | -- | -- |
| 197.61 | 0.655 | 7.6 | 3.14 | -- | -2.21 | -- | -- | 1.06 | -- | 31.8 | 388 | 0.831 | -- |
| 211.31 | 0.677 | 7.85 | -- | 2.13 | -2.72 | -- | -- | 0.167 | 20.3 | 16.8 | 46778 | 0.324 | -- |
| 454.73 | 0.996 | 7.6 | 3.17 | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
| 466.91 | 1.01 | 7.74 | -- | 2.13 | -- | -- | -- | 0.682 | 20.4 | -- | -- | -- | -- |
| 453.89 | 0.992 | 7.65 | -- | -- | -2.18 | -- | -- | 0.719 | -- | 29.8 | 417 | 0.686 | -- |
| 720.24 | 1.25 | 7.68 | -- | -- | -- | -- | -- | 0.662 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 7 | 136.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 27 | 138.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 29 | 138.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 71 | 141.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 85 | 142.22 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 6 |
| 90 | 142.55 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 102 | 143.12 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 124 | 143.73 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 143 | 144.49 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 147 | 144.62 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 3 |
| 306 | 148.65 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 331 | 149.19 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 387 | 150.27 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 441 | 151.42 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 19 |
| 544 | 152.95 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 611 | 154.08 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 5 |
| 683 | 155.18 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 811 | 157.03 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 825 | 157.23 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 10 |
| 851 | 157.47 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 864 | 157.67 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 956 | 158.64 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |