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Os05g0188100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0424) R2 : 0.758
β1 : 1.12 (0.16) R2dD : 0.0275 R2D : -0.0186
β2 : 3.66 (0.108) R2dC : 0.6 R2C : 0.605
β3 : -2.53 (0.222) R2dE : 0.0705 R2E : 0.0927
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.977 (0.0906) R2dN8 : 0.0786 R2N8 : 0.0495
σ : 0.792
deviance : 289
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C
peak time of C : 19.9
E
wheather : humidity
threshold : 107.1
memory length : 1455
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11
open length of G : 0.986

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
274.08 0.778 13.9 1.15 3.66 -2.11 2.3 1.07 0.968 19.9 84 1462 11 1.03
275.8 0.773 13.9 1.12 3.66 -2.16 2.21 -- 0.974 19.9 86 1462 11 1.03
289.44 0.792 13.9 1.06 3.65 -2.15 -- 0.811 0.953 19.9 84 1465 11 1.02
289 0.792 13.9 1.12 3.66 -2.53 -- -- 0.977 19.9 107.1 1455 11 0.986
939.95 1.43 13.8 0.866 -- -3.2 -- 1.83 0.686 -- 216.4 1454 11.4 1.12
351.63 0.879 13.9 0.705 3.71 -- 2.13 -- 1.01 20 -- -- -- --
365.07 0.895 13.9 0.643 3.71 -- -- -- 1.01 20.1 -- -- -- --
936.38 1.43 13.9 1.01 -- -3.44 -- -- 0.605 -- 220.5 1453 11.3 1.1
317.9 0.83 13.9 -- 3.6 -2.11 -- -- 0.974 19.9 120.1 1454 11 0.983
1118.26 1.56 13.8 0.609 -- -- -- -- 0.964 -- -- -- -- --
375.98 0.907 13.9 -- 3.7 -- -- -- 0.938 20.1 -- -- -- --
959.66 1.44 13.9 -- -- -3.31 -- -- 0.559 -- 193.8 1451 11.4 0.667
1128.05 1.57 13.8 -- -- -- -- -- 0.897 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 281.56 humidity 80 1440 < th dose dependent rect. 11 1
3 282.74 humidity 50 1440 > th dose dependent rect. 11 1
4 282.95 humidity 80 1440 < th dose dependent rect. 6 6
9 283.27 humidity 80 1440 < th dose dependent rect. 9 3
23 285.42 temperature 20 720 < th dose independent rect. 1 6
25 285.50 humidity 80 1440 < th dose independent rect. 8 6
30 285.80 humidity 80 1440 < th dose independent rect. 6 8
33 285.88 humidity 50 1440 > th dose dependent rect. 9 3
35 285.97 humidity 80 1440 > th dose independent rect. 6 8
37 286.01 humidity 70 1440 > th dose independent rect. 11 1
39 286.22 humidity 50 10 > th dose dependent rect. 21 23
61 287.36 temperature 20 720 < th dose independent rect. 5 2
114 289.39 humidity 90 10 < th dose dependent rect. 15 23
126 289.79 humidity 80 1440 < th dose dependent sin 6 NA
182 291.48 humidity 50 1440 > th dose dependent rect. 5 9
237 292.64 humidity 70 1440 < th dose independent rect. 11 1
278 293.79 temperature 20 720 < th dose independent rect. 3 1
280 293.81 temperature 20 720 > th dose independent rect. 22 9
284 293.84 humidity 90 10 < th dose dependent sin 3 NA
286 293.86 humidity 50 10 > th dose dependent rect. 1 23
318 294.28 temperature 20 720 > th dose independent rect. 1 8
321 294.33 humidity 90 10 < th dose dependent rect. 17 23
327 294.44 humidity 90 30 < th dose dependent rect. 17 21
340 294.66 humidity 90 10 < th dose dependent rect. 20 18
357 294.90 humidity 90 10 < th dose dependent rect. 24 14
372 295.05 humidity 90 10 < th dose dependent rect. 3 11
389 295.19 humidity 50 10 > th dose dependent no NA NA
399 295.33 humidity 90 10 < th dose dependent rect. 22 16
400 295.35 humidity 80 1440 > th dose independent sin 3 NA
413 295.56 humidity 80 1440 < th dose independent sin 4 NA
420 295.77 temperature 20 720 < th dose independent sin 8 NA
446 295.92 temperature 20 720 < th dose dependent rect. 3 2
473 296.18 temperature 20 720 > th dose independent rect. 3 6
476 296.23 humidity 70 1440 > th dose independent sin 7 NA
502 296.68 humidity 90 10 < th dose dependent rect. 3 22
521 297.04 humidity 50 10 > th dose dependent sin 5 NA
523 297.06 temperature 25 720 < th dose dependent rect. 1 8
536 297.25 humidity 50 10 > th dose dependent rect. 23 23
541 297.29 humidity 60 90 > th dose dependent rect. 23 18
560 297.46 humidity 90 10 < th dose dependent rect. 9 23
581 297.76 humidity 90 10 < th dose dependent rect. 22 23
587 297.83 humidity 90 10 < th dose dependent no NA NA
594 297.88 wind 1 14400 > th dose independent rect. 1 1
597 297.89 humidity 90 10 < th dose dependent rect. 6 23
685 298.50 humidity 70 1440 < th dose independent sin 7 NA
692 298.54 humidity 60 90 > th dose dependent rect. 23 16
698 298.58 humidity 90 10 < th dose dependent rect. 24 23
754 298.99 humidity 50 10 > th dose dependent rect. 11 23
778 299.12 temperature 20 720 > th dose independent rect. 5 4
803 299.33 humidity 50 1440 > th dose dependent sin 3 NA
809 299.38 humidity 90 10 < th dose dependent rect. 20 23
810 299.39 humidity 50 90 > th dose dependent rect. 5 23
832 299.57 temperature 20 720 > th dose independent rect. 5 2
834 299.60 temperature 20 1440 < th dose independent rect. 23 1
848 299.61 humidity 50 90 > th dose dependent rect. 11 23
888 299.95 radiation 20 1440 < th dose dependent rect. 11 1
916 300.14 humidity 60 10 > th dose dependent rect. 23 21
938 300.27 humidity 90 10 < th dose dependent rect. 13 23
968 300.51 humidity 90 10 < th dose dependent rect. 11 23
977 300.60 temperature 20 720 > th dose independent sin 10 NA
981 300.60 humidity 50 10 > th dose dependent rect. 13 23