Os05g0186900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0186900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 241.18 | 0.73 | 8.52 | -0.161 | 2.27 | 2.13 | -2.68 | 8.62 | 0.453 | 0.266 | 1.377 | 10145 | -- | -- |
| 291.69 | 0.795 | 8.37 | 0.583 | 2.21 | 1.91 | -2.65 | -- | 0.567 | 0.291 | 8.019 | 12469 | -- | -- |
| 244.41 | 0.728 | 8.51 | -0.167 | 2.66 | 1.9 | -- | 8.93 | 0.416 | 23.9 | 1.59 | 9760 | -- | -- |
| 288.07 | 0.79 | 8.33 | 1.83 | 2.43 | 1.56 | -- | -- | 0.914 | 0.392 | 20.01 | 12747 | -- | -- |
| 383.55 | 0.917 | 8.38 | 1.71 | -- | 1.66 | -- | -2.05 | 0.546 | -- | 1.59 | 9760 | -- | -- |
| 359.46 | 0.889 | 8.45 | 1.53 | 2.28 | -- | -2.42 | -- | 0.435 | 0.207 | -- | -- | -- | -- |
| 384.73 | 0.919 | 8.44 | 1.63 | 2.29 | -- | -- | -- | 0.445 | 0.258 | -- | -- | -- | -- |
| 404.02 | 0.94 | 8.37 | 1.66 | -- | 1.67 | -- | -- | 0.575 | -- | 2.763 | 17614 | -- | -- |
| 335.55 | 0.853 | 8.32 | -- | 2.36 | 1.66 | -- | -- | 0.877 | 0.401 | 51.9 | 15982 | -- | -- |
| 715.13 | 1.25 | 8.4 | 1.7 | -- | -- | -- | -- | 0.481 | -- | -- | -- | -- | -- |
| 454.65 | 0.997 | 8.48 | -- | 2.31 | -- | -- | -- | 0.264 | 0.295 | -- | -- | -- | -- |
| 476.51 | 1.02 | 8.42 | -- | -- | 1.68 | -- | -- | 0.391 | -- | 2.763 | 17614 | -- | -- |
| 791.74 | 1.31 | 8.44 | -- | -- | -- | -- | -- | 0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.04 | temperature | 25 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 2 | 225.10 | temperature | 25 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 226.36 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 4 | 226.61 | temperature | 25 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 8 | 227.07 | temperature | 25 | 43200 | < th | dose independent | rect. | 10 | 12 |
| 11 | 227.16 | temperature | 25 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 16 | 227.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 27 | 227.69 | temperature | 25 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 37 | 227.83 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 102 | 228.77 | temperature | 25 | 43200 | < th | dose independent | sin | 21 | NA |
| 107 | 228.82 | temperature | 25 | 43200 | > th | dose independent | sin | 21 | NA |
| 137 | 229.10 | temperature | 25 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 156 | 229.22 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 200 | 229.55 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 268 | 229.91 | temperature | 25 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 297 | 230.06 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 314 | 230.18 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 353 | 230.37 | temperature | 25 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 421 | 230.63 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 494 | 230.92 | temperature | 25 | 43200 | < th | dose dependent | sin | 19 | NA |
| 495 | 230.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 505 | 230.97 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 9 |
| 515 | 231.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 535 | 231.06 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 546 | 231.07 | temperature | 30 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 576 | 231.18 | temperature | 25 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 617 | 231.34 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 648 | 231.42 | temperature | 20 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 775 | 231.73 | temperature | 25 | 43200 | > th | dose independent | no | NA | NA |
| 783 | 231.75 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 803 | 231.81 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 811 | 231.82 | temperature | 20 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 812 | 231.82 | temperature | 20 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 839 | 231.89 | temperature | 25 | 43200 | < th | dose independent | no | NA | NA |
| 890 | 232.01 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 910 | 232.06 | temperature | 30 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 960 | 232.18 | temperature | 20 | 43200 | > th | dose dependent | rect. | 4 | 1 |