Os05g0186300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NADP-malic enzyme.
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Os05g0186300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADP-malic enzyme.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.07 | 0.683 | 10.1 | -2.13 | 3.93 | 1.52 | 1.9 | -1.09 | -0.84 | 7.75 | 73.11 | 1175 | -- | -- |
| 212.31 | 0.679 | 10.1 | -2.05 | 3.94 | 1.42 | 2.03 | -- | -0.842 | 7.75 | 73.3 | 1169 | -- | -- |
| 221.23 | 0.693 | 10.1 | -2.12 | 3.95 | 1.54 | -- | -1.25 | -0.854 | 7.73 | 73 | 1165 | -- | -- |
| 223.57 | 0.696 | 10.1 | -2 | 3.93 | 1.37 | -- | -- | -0.839 | 7.71 | 73.04 | 1178 | -- | -- |
| 1019.86 | 1.49 | 10.2 | -2.02 | -- | 1.37 | -- | -0.973 | -0.883 | -- | 82.87 | 1381 | -- | -- |
| 255.84 | 0.75 | 10.1 | -1.79 | 3.86 | -- | 1.81 | -- | -0.955 | 7.5 | -- | -- | -- | -- |
| 264.9 | 0.762 | 10.1 | -1.74 | 3.87 | -- | -- | -- | -0.958 | 7.48 | -- | -- | -- | -- |
| 1020.34 | 1.49 | 10.2 | -1.88 | -- | 1.32 | -- | -- | -0.871 | -- | 84.28 | 1383 | -- | -- |
| 321.19 | 0.835 | 10.1 | -- | 3.91 | 1.14 | -- | -- | -0.815 | 7.6 | 90.4 | 2646 | -- | -- |
| 1063.12 | 1.52 | 10.2 | -1.68 | -- | -- | -- | -- | -0.897 | -- | -- | -- | -- | -- |
| 345.02 | 0.869 | 10.1 | -- | 3.85 | -- | -- | -- | -0.764 | 7.51 | -- | -- | -- | -- |
| 1039.8 | 1.5 | 10.3 | -- | -- | 2.15 | -- | -- | -0.768 | -- | 69.04 | 28663 | -- | -- |
| 1137.92 | 1.57 | 10.2 | -- | -- | -- | -- | -- | -0.71 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.58 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 2 | 202.14 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 3 | 202.46 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 6 | 203.00 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 7 | 203.37 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 10 | 203.71 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 22 | 205.55 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 23 | 205.62 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 25 | 205.77 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 45 | 207.78 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 10 |
| 51 | 208.26 | temperature | 15.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 53 | 208.42 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 57 | 208.62 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 59 | 208.66 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 61 | 208.68 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 64 | 208.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 65 | 208.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 66 | 208.77 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 71 | 208.98 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 73 | 208.98 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 74 | 208.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 77 | 208.98 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 78 | 208.98 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 79 | 208.98 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 83 | 208.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 91 | 209.32 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 95 | 209.41 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 108 | 209.94 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 109 | 209.95 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 131 | 210.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 132 | 210.18 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 133 | 210.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 136 | 210.39 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 144 | 210.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 146 | 210.74 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 21 |
| 148 | 210.74 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 174 | 211.17 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 178 | 211.31 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 179 | 211.31 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 190 | 211.65 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 240 | 212.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 10 |
| 243 | 212.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 248 | 212.34 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 250 | 212.36 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 255 | 212.43 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 266 | 212.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 268 | 212.71 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 278 | 212.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 280 | 212.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 281 | 212.91 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 292 | 212.92 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 304 | 212.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 306 | 212.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 307 | 212.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 310 | 212.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 311 | 212.99 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 316 | 212.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 318 | 213.02 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 322 | 213.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 384 | 213.39 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 386 | 213.40 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 389 | 213.45 | humidity | 60.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 398 | 213.49 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 401 | 213.53 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 8 |
| 414 | 213.62 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 461 | 213.69 | humidity | 60.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 472 | 213.76 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 476 | 213.78 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 477 | 213.78 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 480 | 213.78 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 481 | 213.78 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 487 | 213.78 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 489 | 213.78 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 490 | 213.78 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 501 | 213.82 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 546 | 214.01 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 549 | 214.02 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 572 | 214.10 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 579 | 214.19 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 615 | 214.32 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 618 | 214.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 623 | 214.41 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 663 | 214.60 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 664 | 214.60 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 667 | 214.64 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 16 |
| 681 | 214.64 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 694 | 214.77 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 695 | 214.77 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 716 | 214.83 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 734 | 214.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 766 | 215.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 771 | 215.11 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 785 | 215.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 787 | 215.16 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 788 | 215.16 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 790 | 215.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 791 | 215.16 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 858 | 215.41 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 883 | 215.50 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 906 | 215.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 915 | 215.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 936 | 215.82 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 980 | 216.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 5 |