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Os05g0184000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0222) R2 : 0.802
β1 : -0.732 (0.0813) R2dD : 0.0366 R2D : 0.0334
β2 : 2.22 (0.0532) R2dC : 0.764 R2C : 0.757
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.123 (0.0474) R2dN8 : 0.00395 R2N8 : 0.00832
σ : 0.418
deviance : 79.55
__
_____
C
peak time of C : 1.28
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.94 0.382 10.2 -0.699 1.45 0.829 -0.338 0.635 0.13 2.07 18.95 8 -- --
66.7 0.38 10.2 -0.707 1.45 0.826 0.272 -- 0.128 2.05 18.56 5 -- --
66.05 0.379 10.2 -0.685 1.45 0.833 -- 0.415 0.133 2.07 18.95 6 -- --
66.96 0.381 10.2 -0.713 1.43 0.847 -- -- 0.127 2.12 18.03 5 -- --
114.16 0.498 10.2 -0.656 -- 1.74 -- 0.331 0.213 -- 15.42 13 -- --
78.88 0.416 10.2 -0.718 2.22 -- 0.403 -- 0.126 1.27 -- -- -- --
79.55 0.418 10.2 -0.732 2.22 -- -- -- 0.123 1.28 -- -- -- --
93.86 0.451 10.2 -0.678 -- 1.78 -- -- 0.197 -- 6.042 171 -- --
80.29 0.417 10.2 -- 1.43 0.856 -- -- 0.205 2.05 20.89 6 -- --
385.15 0.917 10.2 -0.645 -- -- -- -- 0.169 -- -- -- -- --
93.68 0.453 10.2 -- 2.21 -- -- -- 0.205 1.27 -- -- -- --
104.94 0.477 10.2 -- -- 1.79 -- -- 0.273 -- 2.973 205 -- --
396.14 0.929 10.2 -- -- -- -- -- 0.241 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.06 temperature 15.0 270 > th dose dependent rect. 24 5
2 56.71 temperature 15.0 270 > th dose dependent rect. 1 3
6 57.18 temperature 20.0 270 > th dose independent rect. 24 5
9 57.60 temperature 20.0 270 > th dose independent rect. 1 3
23 58.62 temperature 20.0 10 > th dose independent rect. 2 5
25 58.64 temperature 20.0 90 > th dose independent rect. 15 15
43 59.57 radiation 30.0 90 < th dose independent rect. 15 15
53 59.78 radiation 30.0 10 < th dose dependent rect. 14 17
57 59.91 temperature 20.0 10 > th dose dependent rect. 3 3
58 59.91 temperature 10.0 90 > th dose dependent rect. 15 15
64 60.05 wind 9.0 270 < th dose independent rect. 14 15
78 60.34 radiation 40.0 90 < th dose dependent rect. 15 15
80 60.38 precipitation 0.1 90 < th dose independent rect. 6 9
81 60.38 precipitation 0.1 90 < th dose dependent rect. 6 9
87 60.43 wind 9.0 270 < th dose dependent rect. 24 5
88 60.45 temperature 10.0 90 > th dose independent rect. 6 9
89 60.45 atmosphere 1015.0 90 < th dose independent rect. 6 9
90 60.45 temperature 10.0 90 > th dose independent rect. 15 15
93 60.49 humidity 60.0 270 > th dose dependent rect. 24 5
99 60.53 atmosphere 995.0 270 > th dose independent rect. 5 9
103 60.55 temperature 15.0 10 > th dose dependent rect. 2 5
104 60.57 wind 9.0 270 < th dose independent rect. 5 9
117 60.67 atmosphere 1015.0 90 < th dose independent rect. 15 15
118 60.67 humidity 60.0 270 > th dose dependent rect. 1 3
133 60.87 radiation 10.0 10 < th dose dependent rect. 3 16
140 60.90 wind 3.0 270 < th dose independent rect. 24 5
147 60.97 wind 9.0 270 < th dose dependent rect. 14 15
148 61.00 humidity 80.0 270 > th dose independent rect. 24 5
154 61.04 humidity 50.0 270 > th dose independent rect. 5 9
162 61.09 humidity 80.0 270 > th dose independent rect. 1 3
164 61.09 radiation 10.0 10 < th dose independent rect. 2 17
175 61.20 temperature 10.0 10 > th dose dependent rect. 16 14
181 61.25 wind 9.0 270 < th dose dependent rect. 1 3
183 61.27 radiation 1.0 270 < th dose independent rect. 24 5
185 61.27 precipitation 0.1 270 < th dose independent rect. 5 19
187 61.27 precipitation 0.1 270 < th dose dependent rect. 5 19
188 61.28 radiation 10.0 270 < th dose dependent rect. 24 5
189 61.28 wind 9.0 270 < th dose dependent rect. 24 18
190 61.30 atmosphere 1010.0 270 < th dose independent rect. 24 5
195 61.31 wind 7.0 270 < th dose independent rect. 24 5
196 61.31 temperature 10.0 270 > th dose independent rect. 24 5
198 61.31 temperature 30.0 270 < th dose independent rect. 24 5
199 61.31 humidity 50.0 270 > th dose independent rect. 24 5
202 61.31 atmosphere 995.0 270 > th dose independent rect. 24 5
206 61.31 temperature 10.0 270 > th dose independent rect. 5 19
213 61.40 atmosphere 995.0 90 > th dose independent rect. 15 15
220 61.46 temperature 20.0 270 > th dose independent rect. 24 19
225 61.49 precipitation 0.1 270 < th dose independent rect. 24 5
229 61.49 precipitation 0.1 270 < th dose dependent rect. 24 5
237 61.55 wind 3.0 270 < th dose independent rect. 1 3
239 61.56 temperature 20.0 270 > th dose independent rect. 1 17
243 61.57 atmosphere 995.0 270 > th dose dependent rect. 24 5
263 61.74 precipitation 0.1 270 < th dose independent rect. 4 21
264 61.74 precipitation 0.1 270 < th dose dependent rect. 4 21
265 61.75 wind 9.0 270 < th dose independent rect. 1 3
266 61.75 temperature 10.0 270 > th dose independent rect. 1 3
268 61.75 temperature 30.0 270 < th dose independent rect. 1 3
269 61.75 humidity 50.0 270 > th dose independent rect. 1 3
272 61.75 atmosphere 995.0 270 > th dose independent rect. 1 3
273 61.75 atmosphere 1010.0 270 < th dose independent rect. 1 3
275 61.75 radiation 1.0 270 < th dose independent rect. 1 3
280 61.75 temperature 10.0 270 > th dose independent rect. 4 21
282 61.75 radiation 1.0 270 < th dose dependent rect. 1 3
294 61.82 precipitation 0.1 270 < th dose independent rect. 14 15
296 61.82 precipitation 0.1 270 < th dose dependent rect. 14 15
331 61.95 precipitation 0.1 270 < th dose independent rect. 1 3
333 61.95 precipitation 0.1 270 < th dose dependent rect. 1 3
336 61.96 radiation 30.0 10 < th dose dependent rect. 12 19
337 61.97 temperature 30.0 720 < th dose dependent rect. 20 4
339 61.99 wind 9.0 270 < th dose independent rect. 5 19
357 62.08 radiation 1.0 90 > th dose independent rect. 6 9
375 62.16 wind 7.0 270 < th dose independent rect. 24 18
389 62.24 humidity 70.0 30 > th dose dependent rect. 2 5
417 62.34 wind 9.0 90 < th dose dependent rect. 2 17
429 62.40 atmosphere 995.0 270 > th dose independent rect. 5 19
488 62.58 wind 3.0 10 < th dose dependent rect. 3 4
491 62.59 radiation 10.0 10 < th dose independent rect. 2 20
527 62.70 radiation 20.0 10 < th dose dependent rect. 3 4
550 62.79 wind 3.0 90 < th dose dependent rect. 3 2
557 62.81 radiation 10.0 10 < th dose independent rect. 2 5
572 62.86 precipitation 0.1 90 < th dose independent rect. 19 7
575 62.86 precipitation 0.1 90 < th dose dependent rect. 19 7
586 62.91 temperature 20.0 10 > th dose independent rect. 7 9
598 62.94 atmosphere 995.0 270 > th dose independent rect. 18 6
609 62.98 wind 9.0 90 < th dose dependent rect. 3 2
616 63.01 atmosphere 1015.0 270 < th dose independent rect. 24 18
621 63.02 temperature 10.0 270 > th dose independent rect. 18 6
622 63.02 humidity 50.0 270 > th dose independent rect. 18 6
623 63.02 radiation 20.0 270 < th dose independent rect. 18 6
626 63.02 temperature 10.0 270 > th dose independent rect. 24 18
631 63.03 radiation 30.0 270 < th dose dependent rect. 18 6
639 63.05 radiation 1.0 10 > th dose independent rect. 6 10
646 63.07 wind 9.0 270 < th dose independent rect. 18 6
653 63.08 temperature 30.0 270 < th dose independent rect. 19 5
669 63.09 humidity 50.0 270 > th dose independent rect. 5 19
673 63.09 radiation 20.0 10 < th dose dependent rect. 2 20
677 63.11 wind 9.0 10 < th dose independent rect. 16 14
696 63.15 radiation 20.0 10 < th dose dependent rect. 10 21
710 63.17 wind 9.0 10 < th dose dependent rect. 16 15
712 63.18 precipitation 0.1 10 < th dose independent rect. 6 10
716 63.18 precipitation 0.1 10 < th dose dependent rect. 6 10
718 63.19 humidity 80.0 10 > th dose independent rect. 2 5
723 63.19 radiation 10.0 90 < th dose dependent rect. 2 9
727 63.20 atmosphere 1015.0 10 < th dose independent rect. 16 15
733 63.21 temperature 10.0 10 > th dose independent rect. 6 10
735 63.21 atmosphere 1015.0 10 < th dose independent rect. 6 10
736 63.21 temperature 10.0 10 > th dose independent rect. 16 14
737 63.21 radiation 40.0 10 < th dose independent rect. 16 14
743 63.22 wind 9.0 90 < th dose independent rect. 3 2
744 63.22 temperature 10.0 90 > th dose independent rect. 3 2
746 63.22 temperature 30.0 90 < th dose independent rect. 3 2
747 63.22 humidity 50.0 90 > th dose independent rect. 3 2
750 63.22 atmosphere 995.0 90 > th dose independent rect. 3 2
751 63.22 atmosphere 1010.0 90 < th dose independent rect. 3 2
825 63.30 temperature 10.0 720 > th dose dependent rect. 17 10
865 63.34 wind 9.0 10 < th dose independent rect. 6 10
883 63.37 precipitation 0.1 10 < th dose independent rect. 7 19
886 63.37 precipitation 0.1 10 < th dose dependent rect. 7 19
888 63.38 temperature 30.0 90 < th dose independent rect. 19 7
899 63.38 temperature 10.0 90 > th dose independent rect. 2 17
900 63.38 atmosphere 1015.0 90 < th dose independent rect. 2 17
934 63.43 radiation 20.0 10 < th dose dependent rect. 2 7
945 63.45 wind 1.0 270 > th dose independent rect. 5 19
954 63.46 radiation 1.0 270 < th dose dependent rect. 24 11
955 63.47 atmosphere 995.0 10 > th dose independent rect. 6 10
983 63.51 precipitation 0.1 90 < th dose independent rect. 3 2
985 63.51 precipitation 0.1 90 < th dose dependent rect. 3 2