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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0183300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Seven transmembrane protein Mlo6.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.38 (0.0236) R2 : 0.000871
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0313 (0.0496) R2dN8 : 0.00113 R2N8 : 0.000871
σ : 0.444
deviance : 90.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.64 0.417 3.41 -0.327 0.0856 -0.623 -0.508 2.72 -0.0694 2.95 1.017 27 -- --
82.31 0.426 3.39 -0.194 0.127 -0.391 -0.734 -- -0.0636 3.2 0.8153 20 -- --
78.95 0.414 3.41 -0.302 0.0818 -0.55 -- 2.66 -0.0776 2.82 1.026 16 -- --
83.92 0.429 3.39 -0.178 0.14 -0.376 -- -- -0.0594 4.56 0.8153 20 -- --
79.31 0.415 3.41 -0.296 -- -0.589 -- 2.65 -0.0717 -- 1 16 -- --
85.88 0.434 3.39 -0.161 0.214 -- -0.702 -- -0.0566 3.67 -- -- -- --
87.27 0.437 3.38 -0.15 0.218 -- -- -- -0.0527 4.36 -- -- -- --
84.88 0.431 3.39 -0.178 -- -0.436 -- -- -0.057 -- 0.8153 20 -- --
84.75 0.431 3.38 -- 0.14 -0.361 -- -- -0.0394 4.58 0.8134 16 -- --
89.82 0.443 3.38 -0.141 -- -- -- -- -0.0469 -- -- -- -- --
87.86 0.438 3.38 -- 0.215 -- -- -- -0.036 4.38 -- -- -- --
85.7 0.433 3.38 -- -- -0.421 -- -- -0.0371 -- 0.8153 20 -- --
90.35 0.444 3.38 -- -- -- -- -- -0.0313 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.92 temperature 20.0 30 > th dose independent rect. 2 1
2 71.02 temperature 20.0 30 > th dose dependent rect. 2 1
4 71.25 atmosphere 1005.0 30 > th dose independent rect. 2 1
5 71.25 atmosphere 1005.0 30 > th dose dependent rect. 2 1
6 71.30 wind 3.0 30 < th dose dependent rect. 2 1
11 71.40 wind 3.0 30 < th dose independent rect. 2 1
12 71.41 humidity 90.0 30 > th dose independent rect. 2 1
16 71.48 humidity 80.0 30 > th dose dependent rect. 2 1
23 71.57 wind 9.0 30 < th dose independent rect. 2 1
24 71.57 temperature 10.0 30 > th dose independent rect. 2 1
26 71.57 temperature 30.0 30 < th dose independent rect. 2 1
27 71.57 humidity 50.0 30 > th dose independent rect. 2 1
31 71.57 atmosphere 1010.0 30 < th dose independent rect. 2 1
33 71.57 radiation 1.0 30 < th dose independent rect. 2 1
38 71.57 precipitation 0.1 30 < th dose independent rect. 2 1
39 71.57 temperature 10.0 30 > th dose independent rect. 3 23
40 71.57 radiation 1.0 30 < th dose dependent rect. 2 1
45 71.57 precipitation 0.1 30 < th dose dependent rect. 2 1
46 71.62 radiation 1.0 4320 < th dose dependent rect. 3 1
51 71.92 radiation 10.0 43200 < th dose dependent rect. 3 1
63 72.03 wind 9.0 1440 < th dose independent rect. 3 1
64 72.03 temperature 10.0 1440 > th dose independent rect. 3 1
67 72.03 temperature 30.0 1440 < th dose independent rect. 3 1
71 72.03 humidity 50.0 1440 > th dose independent rect. 3 1
80 72.03 atmosphere 995.0 1440 > th dose independent rect. 3 1
81 72.03 radiation 1.0 1440 < th dose independent rect. 3 1
101 72.03 temperature 10.0 1440 > th dose independent rect. 4 23
104 72.03 atmosphere 1015.0 30 < th dose dependent rect. 2 1
114 72.42 temperature 30.0 30 < th dose dependent rect. 2 1
118 72.50 wind 1.0 30 > th dose independent rect. 2 1
125 72.83 wind 1.0 30 < th dose dependent rect. 5 22
163 73.50 atmosphere 1000.0 30 > th dose independent rect. 3 23
166 73.68 wind 9.0 30 < th dose independent rect. 3 23
175 74.17 precipitation 0.1 30 < th dose independent rect. 3 23
176 74.17 precipitation 0.1 30 < th dose dependent rect. 3 23
177 74.25 wind 1.0 30 < th dose independent rect. 5 22
180 74.66 wind 1.0 30 < th dose independent rect. 2 4
197 75.99 wind 1.0 30 < th dose independent rect. 2 10
200 76.13 wind 1.0 30 > th dose independent rect. 3 23
222 76.86 wind 1.0 30 > th dose independent sin 5 NA
237 77.33 wind 1.0 30 < th dose dependent rect. 2 5
239 77.41 wind 1.0 30 < th dose dependent rect. 5 3
246 77.51 humidity 50.0 30 > th dose independent rect. 3 23
258 77.84 wind 1.0 30 < th dose independent rect. 2 16
264 77.88 wind 1.0 30 < th dose dependent rect. 5 9
297 77.98 wind 1.0 30 < th dose dependent rect. 5 19
305 78.02 wind 1.0 30 < th dose dependent rect. 5 7
309 78.08 wind 1.0 30 < th dose independent rect. 23 4
324 78.28 wind 1.0 30 < th dose dependent rect. 2 10
339 78.53 humidity 90.0 90 < th dose independent rect. 2 1
342 78.55 temperature 30.0 30 < th dose independent rect. 3 23
345 78.58 wind 1.0 30 < th dose independent rect. 13 14
371 78.82 wind 1.0 30 < th dose independent rect. 4 2
392 78.95 wind 1.0 30 < th dose independent sin 4 NA
409 79.21 wind 1.0 30 > th dose independent no NA NA
452 79.49 radiation 1.0 720 > th dose independent rect. 14 1
453 79.49 wind 1.0 30 < th dose dependent rect. 2 16
472 79.61 temperature 20.0 10 > th dose independent rect. 2 4
482 79.69 atmosphere 995.0 30 > th dose dependent rect. 3 23
519 79.93 temperature 25.0 270 > th dose independent rect. 23 4
546 80.12 radiation 1.0 1440 > th dose independent rect. 11 1
551 80.14 radiation 1.0 1440 > th dose independent rect. 9 1
552 80.14 radiation 1.0 1440 < th dose independent rect. 9 1
553 80.14 radiation 1.0 1440 < th dose dependent rect. 9 1
555 80.15 radiation 1.0 1440 < th dose independent rect. 11 1
557 80.15 radiation 1.0 1440 < th dose dependent rect. 11 1
558 80.16 radiation 1.0 1440 < th dose independent rect. 9 3
559 80.16 radiation 1.0 1440 < th dose dependent rect. 9 3
596 80.29 radiation 1.0 1440 > th dose independent rect. 11 3
610 80.35 wind 1.0 10 > th dose independent rect. 22 14
614 80.38 radiation 1.0 1440 < th dose independent rect. 13 1
631 80.38 radiation 1.0 1440 < th dose dependent rect. 13 1
651 80.42 wind 1.0 30 < th dose dependent sin 3 NA
652 80.42 wind 1.0 30 < th dose dependent rect. 23 4
653 80.43 radiation 1.0 1440 < th dose independent rect. 11 3
655 80.43 radiation 1.0 1440 < th dose dependent rect. 11 3
698 80.55 wind 1.0 30 < th dose independent rect. 17 15
721 80.58 wind 1.0 30 < th dose independent rect. 11 21
737 80.60 wind 1.0 10 > th dose independent rect. 14 23
744 80.62 radiation 1.0 1440 > th dose independent rect. 9 5
799 80.70 wind 1.0 30 < th dose independent rect. 5 7
817 80.73 wind 1.0 30 < th dose independent rect. 17 19
907 80.84 wind 1.0 30 < th dose dependent rect. 13 14
927 80.86 wind 1.0 30 < th dose independent no NA NA
982 80.95 humidity 70.0 14400 > th dose independent rect. 20 12
997 80.99 humidity 90.0 720 > th dose independent rect. 12 1