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Os05g0181300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.19 (0.0383) R2 : 0.4
β1 : -0.764 (0.14) R2dD : 0.0405 R2D : -0.0189
β2 : 1.38 (0.0909) R2dC : 0.305 R2C : 0.271
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.649 (0.0818) R2dN8 : 0.111 R2N8 : 0.0583
σ : 0.72
deviance : 236.51
__
_____
C
peak time of C : 0.564
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
224.08 0.703 8.17 -0.745 0.265 0.988 0.17 -0.165 -0.596 23.6 7.43 112 -- --
224.1 0.697 8.17 -0.748 0.277 0.979 -0.0075 -- -0.602 23.7 7.532 111 -- --
224.1 0.697 8.17 -0.748 0.262 0.994 -- -0.0317 -0.6 23.6 7.661 111 -- --
224.1 0.697 8.17 -0.754 0.282 0.973 -- -- -0.598 23.7 7.62 111 -- --
225.1 0.699 8.15 -0.731 -- 1.17 -- -0.0518 -0.576 -- 7.3 105 -- --
236.51 0.721 8.19 -0.763 1.38 -- 0.025 -- -0.649 0.563 -- -- -- --
236.51 0.72 8.19 -0.764 1.38 -- -- -- -0.649 0.564 -- -- -- --
225.03 0.699 8.16 -0.749 -- 1.18 -- -- -0.587 -- 7.419 111 -- --
238.85 0.72 8.15 -- 0.219 1.04 -- -- -0.512 22.6 6.707 122 -- --
356.55 0.882 8.17 -0.715 -- -- -- -- -0.625 -- -- -- -- --
251.88 0.742 8.17 -- 1.37 -- -- -- -0.564 0.536 -- -- -- --
239.74 0.721 8.14 -- -- 1.17 -- -- -0.506 -- 6.685 115 -- --
370.04 0.898 8.15 -- -- -- -- -- -0.546 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 214.68 temperature 25.0 10 > th dose independent rect. 6 11
2 214.96 temperature 25.0 90 < th dose independent rect. 4 16
3 215.03 temperature 25.0 90 > th dose independent rect. 6 11
4 215.73 temperature 15.0 10 > th dose dependent rect. 6 11
13 216.73 atmosphere 995.0 90 > th dose independent rect. 6 11
33 218.40 temperature 10.0 90 > th dose dependent rect. 6 11
35 218.54 atmosphere 995.0 10 > th dose independent rect. 6 11
41 218.90 humidity 90.0 10 < th dose independent rect. 6 11
46 219.01 humidity 90.0 90 < th dose independent rect. 6 11
55 219.30 radiation 1.0 90 > th dose independent rect. 6 11
56 219.36 atmosphere 995.0 90 > th dose independent rect. 5 23
59 219.45 radiation 1.0 720 < th dose dependent rect. 1 14
68 219.92 atmosphere 995.0 10 > th dose independent rect. 8 10
71 220.03 temperature 25.0 90 > th dose independent sin 1 NA
79 220.26 atmosphere 995.0 10 > th dose independent rect. 21 23
86 220.41 temperature 25.0 30 < th dose independent rect. 11 10
88 220.46 atmosphere 995.0 30 > th dose independent rect. 13 23
95 220.63 temperature 25.0 90 < th dose independent sin 1 NA
105 220.77 radiation 1.0 10 > th dose independent rect. 6 11
107 220.83 temperature 30.0 270 > th dose dependent rect. 14 1
108 220.85 atmosphere 995.0 30 > th dose independent rect. 9 23
109 220.87 atmosphere 995.0 10 > th dose independent rect. 6 23
110 220.88 temperature 30.0 10 > th dose dependent rect. 16 3
131 220.96 temperature 30.0 90 < th dose dependent rect. 4 16
154 221.30 atmosphere 1000.0 90 < th dose dependent rect. 14 4
156 221.32 atmosphere 1000.0 270 < th dose dependent rect. 14 1
160 221.34 temperature 30.0 90 > th dose dependent rect. 15 4
184 221.46 humidity 90.0 30 < th dose independent rect. 23 19
193 221.57 temperature 30.0 90 > th dose dependent sin 12 NA
199 221.59 radiation 1.0 720 < th dose dependent rect. 1 6
210 221.68 radiation 1.0 270 > th dose independent rect. 18 22
234 221.86 atmosphere 1010.0 10 < th dose independent rect. 8 9
236 221.87 atmosphere 995.0 30 > th dose independent rect. 3 23
241 221.90 humidity 90.0 90 < th dose independent rect. 3 14
247 221.93 radiation 10.0 1440 < th dose independent rect. 21 8
256 222.01 temperature 25.0 90 > th dose independent rect. 19 22
257 222.01 atmosphere 995.0 30 > th dose independent rect. 11 23
258 222.01 atmosphere 995.0 90 > th dose independent rect. 19 23
265 222.05 radiation 1.0 270 > th dose independent rect. 4 12
275 222.07 atmosphere 995.0 10 > th dose independent sin 7 NA
276 222.07 atmosphere 995.0 30 > th dose independent sin 23 NA
325 222.34 humidity 90.0 30 < th dose independent rect. 1 16
334 222.41 temperature 25.0 90 > th dose independent rect. 6 15
335 222.43 radiation 1.0 720 < th dose dependent sin 5 NA
354 222.55 atmosphere 1010.0 10 < th dose independent rect. 6 11
359 222.61 radiation 10.0 30 < th dose dependent rect. 5 15
379 222.67 humidity 50.0 10 > th dose dependent rect. 18 14
410 222.86 atmosphere 995.0 30 > th dose independent rect. 17 23
415 222.90 atmosphere 995.0 90 > th dose independent rect. 13 13
417 222.92 wind 7.0 10 < th dose independent rect. 6 11
425 222.96 humidity 50.0 14400 > th dose independent rect. 18 13
427 222.98 radiation 20.0 1440 < th dose dependent rect. 21 8
431 223.01 radiation 1.0 720 < th dose dependent rect. 23 8
450 223.10 humidity 90.0 90 < th dose independent rect. 19 22
456 223.13 radiation 1.0 270 < th dose independent rect. 22 22
465 223.18 radiation 1.0 90 < th dose independent rect. 4 16
471 223.22 precipitation 0.1 90 < th dose independent rect. 6 11
473 223.22 precipitation 0.1 90 < th dose dependent rect. 6 11
476 223.24 atmosphere 995.0 10 > th dose independent sin 15 NA
483 223.25 atmosphere 1015.0 10 < th dose independent rect. 17 13
524 223.43 atmosphere 1000.0 10 > th dose independent rect. 18 14
537 223.52 precipitation 0.1 10 < th dose independent rect. 6 11
541 223.52 precipitation 0.1 10 < th dose dependent rect. 6 11
549 223.58 humidity 70.0 90 > th dose dependent rect. 18 1
550 223.58 radiation 10.0 90 < th dose dependent rect. 12 20
556 223.62 temperature 30.0 10 > th dose independent rect. 15 4
591 223.69 humidity 70.0 10 > th dose dependent rect. 18 2
592 223.70 temperature 10.0 10 > th dose independent rect. 6 11
596 223.70 temperature 10.0 10 > th dose independent rect. 17 13
597 223.70 radiation 20.0 10 < th dose independent rect. 17 13
604 223.72 wind 9.0 10 < th dose independent rect. 17 13
611 223.75 wind 7.0 90 < th dose independent rect. 6 11
623 223.75 temperature 10.0 720 > th dose dependent rect. 5 3
627 223.77 atmosphere 995.0 270 > th dose independent sin 6 NA
670 223.82 atmosphere 1010.0 720 < th dose independent rect. 5 2
676 223.83 humidity 50.0 14400 > th dose independent rect. 18 15
677 223.83 humidity 70.0 30 > th dose dependent rect. 2 18
682 223.85 temperature 30.0 30 < th dose dependent rect. 10 10
717 223.92 temperature 20.0 720 > th dose independent rect. 5 2
741 224.01 radiation 1.0 90 > th dose independent sin 0 NA
743 224.02 atmosphere 1015.0 90 < th dose independent rect. 17 13
748 224.04 radiation 1.0 90 < th dose independent sin 0 NA
754 224.06 radiation 30.0 1440 < th dose independent rect. 18 13
755 224.06 humidity 90.0 90 > th dose independent rect. 4 16
761 224.08 humidity 60.0 14400 > th dose independent rect. 21 8
783 224.15 radiation 20.0 90 < th dose dependent rect. 17 14
784 224.15 radiation 10.0 90 < th dose dependent rect. 21 23
788 224.16 humidity 80.0 10 > th dose dependent rect. 5 15
798 224.20 radiation 1.0 10 > th dose independent rect. 8 9
812 224.24 humidity 90.0 30 < th dose independent rect. 23 22
815 224.24 radiation 40.0 10 < th dose dependent rect. 17 15
816 224.25 atmosphere 1000.0 10 > th dose independent rect. 18 12
819 224.26 temperature 20.0 90 > th dose independent rect. 17 13
823 224.26 wind 9.0 10 < th dose dependent rect. 5 16
831 224.28 temperature 10.0 90 > th dose independent rect. 17 13
832 224.28 radiation 20.0 90 < th dose independent rect. 17 13
849 224.33 wind 9.0 90 < th dose independent rect. 17 13
850 224.33 humidity 90.0 10 > th dose independent rect. 5 16
853 224.35 wind 9.0 1440 < th dose independent rect. 21 8
855 224.35 temperature 25.0 90 > th dose independent rect. 23 22
856 224.35 atmosphere 995.0 30 > th dose independent rect. 23 23
892 224.43 humidity 90.0 30 < th dose independent rect. 13 23
898 224.46 humidity 90.0 90 < th dose independent sin 1 NA
900 224.46 wind 7.0 10 < th dose independent rect. 8 9
911 224.49 radiation 1.0 90 < th dose dependent sin 0 NA
920 224.53 radiation 30.0 10 < th dose independent rect. 17 15
921 224.53 humidity 90.0 30 < th dose independent rect. 6 22
926 224.54 humidity 90.0 30 > th dose independent rect. 2 19
927 224.54 temperature 25.0 30 > th dose independent rect. 6 20
949 224.56 radiation 40.0 270 < th dose dependent rect. 15 14
975 224.59 temperature 10.0 1440 > th dose independent rect. 7 11
978 224.59 temperature 10.0 1440 > th dose independent rect. 18 13
981 224.59 humidity 50.0 1440 > th dose independent rect. 18 13
990 224.60 humidity 90.0 10 < th dose independent sin 0 NA