Os05g0181000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein Hsp70 family protein.
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Os05g0181000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein Hsp70 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.71 | 0.265 | 9.6 | 0.699 | 0.855 | 1.15 | 0.291 | -1.12 | 0.00598 | 17.4 | 1.069 | 741 | -- | -- |
| 31.14 | 0.26 | 9.61 | 0.727 | 0.887 | 1.37 | 1.03 | -- | 0.00733 | 18.2 | 0.362 | 845 | -- | -- |
| 31.73 | 0.262 | 9.6 | 0.71 | 0.843 | 1.15 | -- | -1.47 | 0.00941 | 17.4 | 1.13 | 745 | -- | -- |
| 33.58 | 0.27 | 9.61 | 0.708 | 0.909 | 1.42 | -- | -- | 0.015 | 18.5 | 0.4263 | 867 | -- | -- |
| 35.97 | 0.279 | 9.59 | 0.678 | -- | 0.207 | -- | -1.47 | 0.0135 | -- | 25.6 | 2035 | -- | -- |
| 35.72 | 0.28 | 9.6 | 0.55 | 0.00376 | -- | -1.01 | -- | -0.0535 | 4.51 | -- | -- | -- | -- |
| 37.68 | 0.287 | 9.6 | 0.559 | 0.112 | -- | -- | -- | -0.048 | 10.3 | -- | -- | -- | -- |
| 36.85 | 0.283 | 9.59 | 0.594 | -- | 0.214 | -- | -- | -0.00187 | -- | 72.94 | 1284 | -- | -- |
| 45.19 | 0.313 | 9.63 | -- | 0.533 | 0.829 | -- | -- | -0.0771 | 18.1 | 1.46 | 828 | -- | -- |
| 38.45 | 0.29 | 9.6 | 0.557 | -- | -- | -- | -- | -0.0483 | -- | -- | -- | -- | -- |
| 45.9 | 0.317 | 9.61 | -- | 0.11 | -- | -- | -- | -0.11 | 9.96 | -- | -- | -- | -- |
| 45.46 | 0.315 | 9.62 | -- | -- | -0.132 | -- | -- | -0.109 | -- | 30 | 2693 | -- | -- |
| 46.63 | 0.319 | 9.62 | -- | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.32 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 12 | 30.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 18 |
| 16 | 30.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 18 |
| 19 | 30.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 26 | 30.87 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 44 | 30.91 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 49 | 30.91 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 78 | 30.97 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 87 | 31.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 89 | 31.03 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 114 | 31.06 | temperature | 25.0 | 720 | > th | dose independent | sin | 17 | NA |
| 115 | 31.06 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 116 | 31.07 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 119 | 31.08 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 121 | 31.09 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 127 | 31.10 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 135 | 31.10 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 142 | 31.10 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 152 | 31.11 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 153 | 31.11 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 192 | 31.11 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 21 |
| 196 | 31.12 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 217 | 31.13 | radiation | 1.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 218 | 31.13 | radiation | 1.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 219 | 31.13 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 223 | 31.13 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 224 | 31.14 | humidity | 50.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 237 | 31.16 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 238 | 31.16 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 242 | 31.17 | humidity | 50.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 245 | 31.17 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 248 | 31.17 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 249 | 31.17 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 252 | 31.18 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 11 |
| 255 | 31.18 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 268 | 31.19 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 340 | 31.21 | radiation | 1.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 372 | 31.24 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 396 | 31.24 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 411 | 31.25 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 453 | 31.26 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 498 | 31.28 | radiation | 1.0 | 720 | < th | dose independent | sin | 15 | NA |
| 572 | 31.32 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 19 |
| 613 | 31.35 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 13 |
| 628 | 31.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 676 | 31.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 723 | 31.44 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 724 | 31.44 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 750 | 31.45 | wind | 5.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 754 | 31.45 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 773 | 31.45 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 779 | 31.46 | wind | 5.0 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 780 | 31.46 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 4 |
| 791 | 31.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 807 | 31.47 | radiation | 1.0 | 720 | < th | dose independent | rect. | 4 | 14 |
| 810 | 31.47 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 829 | 31.48 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 868 | 31.49 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 882 | 31.50 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 891 | 31.51 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 893 | 31.51 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 902 | 31.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 904 | 31.52 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 909 | 31.52 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 910 | 31.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 914 | 31.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 940 | 31.55 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 956 | 31.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 958 | 31.55 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 968 | 31.57 | temperature | 25.0 | 720 | < th | dose independent | sin | 16 | NA |