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Os05g0180700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0174) R2 : 0.271
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.579 (0.0448) R2dC : 0.267 R2C : 0.268
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0444 (0.0367) R2dN8 : 0.00303 R2N8 : 0.00336
σ : 0.329
deviance : 49.4
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.26 0.294 10.4 -0.275 0.578 -0.167 0.263 1.9 -0.161 16.2 0.3558 5638 -- --
41.37 0.3 10.4 -0.102 0.552 -0.631 0.422 -- -0.125 15.6 0.009878 14093 -- --
39.45 0.293 10.4 -0.274 0.58 -0.165 -- 1.94 -0.161 16.2 0.3571 5624 -- --
41.7 0.301 10.4 -0.0736 0.564 -0.584 -- -- -0.121 16.1 0.009988 14287 -- --
46.94 0.319 10.4 -0.235 -- -1.26 -- -0.231 -0.155 -- 0.003101 6395 -- --
47.9 0.324 10.4 0.21 0.58 -- 0.334 -- -0.0225 16.2 -- -- -- --
48.2 0.325 10.4 0.213 0.583 -- -- -- -0.0207 16.3 -- -- -- --
46.31 0.317 10.4 -0.141 -- -1.09 -- -- -0.161 -- 2.347e-07 6343 -- --
41.84 0.301 10.4 -- 0.561 -0.548 -- -- -0.118 16 0.0005418 14288 -- --
66.53 0.381 10.3 0.19 -- -- -- -- -0.0362 -- -- -- -- --
49.4 0.329 10.4 -- 0.579 -- -- -- -0.0444 16.3 -- -- -- --
44.6 0.311 10.4 -- -- -1.08 -- -- -0.136 -- 1.393e-06 4922 -- --
67.47 0.383 10.4 -- -- -- -- -- -0.0572 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.30 wind 1.0 43200 > th dose independent rect. 21 1
2 37.35 radiation 40.0 43200 < th dose independent rect. 16 8
3 37.38 radiation 40.0 43200 < th dose independent rect. 16 6
4 37.39 wind 1.0 43200 < th dose independent rect. 21 1
7 37.67 radiation 40.0 43200 < th dose independent rect. 16 15
8 37.80 wind 1.0 14400 < th dose dependent rect. 19 7
10 37.91 wind 1.0 14400 < th dose dependent rect. 22 3
11 37.93 wind 1.0 43200 < th dose dependent rect. 21 1
12 37.96 humidity 70.0 43200 > th dose independent rect. 18 1
16 38.06 wind 1.0 14400 < th dose dependent rect. 20 5
18 38.07 radiation 20.0 43200 > th dose independent rect. 10 1
19 38.08 wind 1.0 43200 < th dose independent rect. 19 1
21 38.11 humidity 70.0 43200 < th dose independent rect. 18 1
22 38.11 radiation 30.0 43200 < th dose dependent rect. 10 1
24 38.13 humidity 70.0 43200 < th dose independent rect. 11 1
26 38.14 humidity 50.0 43200 > th dose dependent rect. 8 1
27 38.15 humidity 70.0 43200 > th dose independent rect. 11 1
28 38.15 radiation 1.0 43200 > th dose independent rect. 13 1
29 38.15 precipitation 0.1 43200 > th dose independent rect. 9 2
30 38.15 precipitation 0.1 43200 > th dose dependent rect. 9 2
31 38.16 radiation 1.0 43200 < th dose independent rect. 13 1
32 38.16 precipitation 0.1 43200 > th dose independent rect. 9 4
33 38.16 radiation 1.0 43200 < th dose dependent rect. 13 1
34 38.16 precipitation 0.1 43200 > th dose dependent rect. 9 4
35 38.17 radiation 20.0 43200 < th dose dependent rect. 8 3
42 38.20 radiation 1.0 4320 > th dose dependent rect. 5 3
44 38.21 precipitation 0.1 43200 > th dose independent rect. 7 6
48 38.21 precipitation 0.1 43200 > th dose dependent rect. 7 6
57 38.22 wind 5.0 43200 > th dose dependent rect. 11 1
60 38.24 humidity 90.0 43200 < th dose dependent rect. 8 1
65 38.26 precipitation 0.1 43200 < th dose independent rect. 18 1
68 38.26 precipitation 0.1 43200 < th dose dependent rect. 18 1
75 38.28 precipitation 0.1 43200 > th dose independent rect. 12 1
76 38.28 precipitation 0.1 43200 < th dose independent rect. 9 2
78 38.28 humidity 80.0 43200 > th dose dependent rect. 12 1
79 38.28 precipitation 0.1 43200 > th dose dependent rect. 12 1
80 38.28 precipitation 0.1 43200 < th dose dependent rect. 9 2
86 38.29 precipitation 0.1 43200 < th dose independent rect. 6 7
88 38.29 precipitation 0.1 43200 < th dose dependent rect. 6 7
95 38.31 radiation 40.0 4320 < th dose dependent rect. 24 8
96 38.31 radiation 40.0 4320 < th dose dependent rect. 22 10
101 38.32 humidity 70.0 43200 < th dose independent rect. 18 5
106 38.33 precipitation 0.1 43200 > th dose independent rect. 18 1
111 38.34 wind 1.0 43200 < th dose independent rect. 19 3
122 38.37 radiation 20.0 43200 < th dose independent rect. 10 1
126 38.38 wind 7.0 43200 > th dose independent rect. 11 1
129 38.38 radiation 40.0 4320 < th dose dependent rect. 6 2
132 38.39 wind 1.0 43200 > th dose independent rect. 19 1
133 38.39 wind 7.0 43200 < th dose independent rect. 10 3
141 38.41 wind 7.0 43200 < th dose independent rect. 11 1
142 38.41 wind 7.0 43200 > th dose independent rect. 10 3
187 38.47 humidity 90.0 43200 > th dose independent rect. 12 1
193 38.48 precipitation 0.1 43200 > th dose dependent rect. 18 1
198 38.50 temperature 10.0 90 > th dose dependent rect. 8 19
200 38.51 radiation 10.0 43200 > th dose independent rect. 6 4
231 38.54 radiation 1.0 43200 < th dose dependent rect. 19 10
232 38.55 precipitation 0.1 43200 < th dose independent rect. 12 1
233 38.55 atmosphere 995.0 43200 > th dose independent rect. 6 2
235 38.55 wind 1.0 14400 < th dose independent rect. 19 7
237 38.55 precipitation 0.1 43200 < th dose dependent rect. 12 1
243 38.56 radiation 1.0 43200 < th dose dependent rect. 4 1
244 38.56 humidity 90.0 43200 < th dose dependent rect. 8 4
245 38.57 radiation 1.0 43200 < th dose dependent rect. 23 6
248 38.58 humidity 90.0 43200 < th dose independent rect. 12 1
272 38.59 radiation 1.0 43200 < th dose dependent rect. 1 4
288 38.61 atmosphere 995.0 43200 > th dose independent rect. 5 4
290 38.61 precipitation 0.1 43200 > th dose dependent rect. 21 1
296 38.63 humidity 70.0 43200 < th dose dependent rect. 13 1
302 38.65 temperature 25.0 43200 > th dose independent rect. 11 1
310 38.66 humidity 70.0 43200 > th dose independent rect. 5 7
363 38.70 humidity 70.0 43200 < th dose independent rect. 17 19
372 38.71 precipitation 0.1 43200 > th dose independent rect. 21 1
373 38.71 precipitation 0.1 43200 < th dose independent rect. 21 1
377 38.71 precipitation 0.1 43200 < th dose dependent rect. 21 1
381 38.72 temperature 25.0 43200 < th dose independent rect. 11 1
383 38.72 radiation 10.0 43200 < th dose independent rect. 18 3
392 38.72 humidity 90.0 43200 < th dose dependent rect. 11 1
397 38.72 humidity 90.0 43200 > th dose dependent rect. 9 6
403 38.73 radiation 20.0 4320 < th dose independent rect. 24 9
404 38.73 radiation 20.0 4320 < th dose independent rect. 22 11
421 38.74 radiation 20.0 4320 < th dose independent rect. 2 7
436 38.74 humidity 80.0 43200 < th dose dependent rect. 18 1
442 38.74 atmosphere 995.0 43200 < th dose dependent rect. 22 14
446 38.74 atmosphere 995.0 43200 < th dose dependent rect. 18 17
453 38.75 radiation 20.0 4320 < th dose independent rect. 7 2
476 38.76 radiation 10.0 43200 > th dose independent sin 9 NA
480 38.76 precipitation 0.1 43200 < th dose independent rect. 18 4
486 38.76 humidity 70.0 43200 > th dose independent rect. 17 19
487 38.76 atmosphere 995.0 43200 < th dose dependent sin 7 NA
489 38.76 radiation 1.0 43200 < th dose dependent rect. 6 1
492 38.76 precipitation 0.1 43200 < th dose dependent rect. 18 4
493 38.76 atmosphere 995.0 43200 < th dose dependent rect. 3 6
496 38.76 atmosphere 995.0 43200 < th dose dependent rect. 2 8
511 38.77 atmosphere 995.0 43200 < th dose independent rect. 5 4
533 38.78 atmosphere 995.0 43200 < th dose independent rect. 4 6
536 38.78 humidity 70.0 43200 < th dose independent rect. 9 15
555 38.79 atmosphere 995.0 43200 < th dose independent rect. 3 9
563 38.79 atmosphere 995.0 43200 < th dose dependent rect. 1 10
570 38.80 radiation 30.0 43200 < th dose independent rect. 5 2
578 38.80 atmosphere 995.0 43200 < th dose independent rect. 2 11
586 38.80 humidity 90.0 43200 > th dose dependent rect. 10 4
595 38.81 precipitation 0.1 43200 > th dose independent rect. 18 4
599 38.81 humidity 70.0 43200 < th dose independent rect. 3 12
617 38.82 wind 9.0 43200 > th dose independent rect. 21 2
648 38.83 humidity 70.0 43200 > th dose independent rect. 18 15
649 38.83 atmosphere 995.0 43200 < th dose independent rect. 23 15
689 38.85 wind 9.0 43200 < th dose independent rect. 21 2
694 38.85 humidity 90.0 43200 > th dose independent rect. 10 4
702 38.85 humidity 70.0 43200 > th dose independent rect. 8 16
733 38.87 humidity 70.0 43200 > th dose independent sin 2 NA
735 38.87 humidity 70.0 43200 < th dose independent sin 3 NA
743 38.87 humidity 70.0 43200 < th dose independent rect. 1 19
755 38.88 humidity 70.0 43200 < th dose independent rect. 4 8
801 38.89 humidity 70.0 43200 > th dose independent rect. 2 18
803 38.89 humidity 70.0 43200 < th dose independent rect. 5 19
845 38.90 wind 9.0 43200 > th dose dependent rect. 1 2
858 38.91 wind 7.0 43200 < th dose independent rect. 3 11
884 38.92 atmosphere 995.0 43200 > th dose independent rect. 23 15
908 38.93 humidity 70.0 43200 < th dose independent sin 19 NA
911 38.93 precipitation 0.1 43200 > th dose independent rect. 14 5
931 38.93 radiation 20.0 43200 < th dose dependent rect. 13 1
936 38.94 wind 9.0 43200 > th dose independent rect. 1 2
940 38.94 wind 7.0 43200 > th dose independent rect. 3 11
951 38.94 atmosphere 995.0 43200 > th dose independent rect. 20 18
971 38.94 wind 1.0 43200 < th dose dependent rect. 10 15
977 38.95 precipitation 0.1 43200 < th dose independent rect. 14 5
999 38.95 atmosphere 995.0 43200 < th dose dependent rect. 5 3