Os05g0179300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os05g0179300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.82 | 0.539 | 11.9 | -0.493 | 0.801 | -2.53 | 1.1 | -0.967 | 0.983 | 6.23 | 1.112 | 1443 | 18.1 | 10 |
| 131.85 | 0.535 | 11.9 | -0.601 | 0.798 | -2.47 | 1.14 | -- | 0.967 | 6.06 | 1.129 | 1444 | 18.1 | 10.1 |
| 134.47 | 0.54 | 11.9 | -0.478 | 0.793 | -2.7 | -- | -1.16 | 1 | 6.02 | 1.152 | 1444 | 18.2 | 10.1 |
| 134.84 | 0.541 | 11.9 | -0.589 | 0.795 | -2.53 | -- | -- | 0.967 | 5.93 | 1.14 | 1445 | 18.1 | 10.1 |
| 165.99 | 0.6 | 12 | -0.241 | -- | -2.92 | -- | -2.67 | 1.07 | -- | 1.246 | 1445 | 18.2 | 10 |
| 201.22 | 0.665 | 12 | -0.965 | 0.912 | -- | 0.996 | -- | 0.803 | 7.18 | -- | -- | -- | -- |
| 203.59 | 0.668 | 12 | -0.942 | 0.913 | -- | -- | -- | 0.802 | 7.46 | -- | -- | -- | -- |
| 166.33 | 0.601 | 12 | -0.613 | -- | -2.49 | -- | -- | 1.01 | -- | 0.9838 | 1447 | 18.2 | 9.71 |
| 143.45 | 0.558 | 12 | -- | 0.777 | -2.78 | -- | -- | 1.04 | 5.73 | 1.173 | 1445 | 18.1 | 10.1 |
| 248.06 | 0.736 | 12 | -0.928 | -- | -- | -- | -- | 0.817 | -- | -- | -- | -- | -- |
| 226.98 | 0.705 | 12 | -- | 0.904 | -- | -- | -- | 0.907 | 7.53 | -- | -- | -- | -- |
| 173.41 | 0.613 | 12 | -- | -- | -2.73 | -- | -- | 1.09 | -- | 1.171 | 1447 | 18.1 | 9.58 |
| 270.76 | 0.768 | 12 | -- | -- | -- | -- | -- | 0.92 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 3 | 138.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 5 | 139.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 11 | 139.39 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 12 | 140.33 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 13 | 140.90 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 14 | 140.93 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 15 | 140.95 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 20 | 141.31 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 21 | 141.37 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 31 | 141.50 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 32 | 141.61 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 35 | 141.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 37 | 141.72 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 38 | 141.72 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 41 | 141.77 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 46 | 141.81 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 55 | 141.93 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 13 |
| 57 | 141.96 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 61 | 141.99 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 13 |
| 70 | 142.03 | wind | 3 | 43200 | > th | dose dependent | sin | 19 | NA |
| 75 | 142.04 | wind | 1 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 76 | 142.05 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 79 | 142.06 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 114 | 142.17 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 2 |
| 209 | 142.42 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 221 | 142.46 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 275 | 142.62 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 297 | 142.68 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 303 | 142.74 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 334 | 142.82 | wind | 9 | 43200 | < th | dose dependent | sin | 21 | NA |
| 377 | 142.94 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 390 | 142.97 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 395 | 142.98 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 398 | 142.98 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 413 | 143.01 | radiation | 10 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 446 | 143.08 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 458 | 143.11 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 510 | 143.25 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 560 | 143.39 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 738 | 143.72 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 774 | 143.81 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 791 | 143.85 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 811 | 143.87 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 833 | 143.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 868 | 143.97 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |