Os05g0178300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0178300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315.08 | 0.834 | 10.9 | -6.49 | 0.737 | 1.85 | 0.995 | -5.78 | -0.636 | 23.3 | 21.19 | 1419 | -- | -- |
| 341.77 | 0.861 | 10.7 | -5.34 | 0.769 | 2.14 | 0.823 | -- | -0.369 | 23.7 | 10.48 | 7668 | -- | -- |
| 318.75 | 0.832 | 10.9 | -6.53 | 0.761 | 1.83 | -- | -5.77 | -0.634 | 23.3 | 21.4 | 1500 | -- | -- |
| 344.19 | 0.864 | 10.7 | -5.28 | 0.781 | 2.11 | -- | -- | -0.354 | 23.1 | 10.5 | 7355 | -- | -- |
| 342.04 | 0.861 | 10.8 | -6.12 | -- | 2.17 | -- | -4.94 | -0.546 | -- | 20.8 | 1064 | -- | -- |
| 415.38 | 0.955 | 10.6 | -4.18 | 0.821 | -- | 0.908 | -- | 0.21 | 23.5 | -- | -- | -- | -- |
| 418.89 | 0.958 | 10.6 | -4.21 | 0.818 | -- | -- | -- | 0.207 | 23.4 | -- | -- | -- | -- |
| 353.32 | 0.875 | 10.7 | -4.9 | -- | 2.41 | -- | -- | -0.204 | -- | 16.1 | 940 | -- | -- |
| 473.88 | 1.01 | 10.5 | -- | 0.852 | -2.68 | -- | -- | 0.435 | 22.1 | 35.1 | 47434 | -- | -- |
| 460.87 | 1 | 10.6 | -4.19 | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
| 886.5 | 1.39 | 10.5 | -- | 0.778 | -- | -- | -- | 0.676 | 23 | -- | -- | -- | -- |
| 512.37 | 1.05 | 10.5 | -- | -- | -2.67 | -- | -- | 0.403 | -- | 35.1 | 47520 | -- | -- |
| 924.18 | 1.42 | 10.5 | -- | -- | -- | -- | -- | 0.68 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 301.31 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 2 | 301.51 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 4 | 301.77 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 18 | 304.73 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 15 |
| 28 | 305.14 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 34 | 305.34 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 44 | 305.57 | wind | 5 | 43200 | < th | dose independent | sin | 22 | NA |
| 57 | 305.86 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 78 | 306.37 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 97 | 306.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 13 |
| 99 | 306.64 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 9 |
| 106 | 306.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 142 | 307.30 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 180 | 307.79 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 217 | 308.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 267 | 308.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 274 | 309.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 301 | 309.43 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 307 | 309.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 19 |
| 310 | 309.48 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 345 | 309.69 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 16 |
| 348 | 309.70 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 21 |
| 353 | 309.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 361 | 309.81 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 362 | 309.81 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 20 |
| 365 | 309.84 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 399 | 310.01 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 400 | 310.02 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 445 | 310.29 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 448 | 310.34 | humidity | 90 | 43200 | > th | dose dependent | sin | 3 | NA |
| 454 | 310.37 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 21 |
| 461 | 310.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 475 | 310.50 | humidity | 90 | 43200 | > th | dose independent | sin | 4 | NA |
| 507 | 310.66 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 621 | 311.31 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 622 | 311.31 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 765 | 311.89 | wind | 9 | 43200 | < th | dose dependent | rect. | 10 | 5 |
| 780 | 311.97 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 973 | 312.59 | humidity | 90 | 43200 | < th | dose independent | sin | 3 | NA |
| 985 | 312.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 994 | 312.69 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 21 |