Os05g0173800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0173800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.58 | 0.395 | 8.92 | 0.386 | 1.31 | 1.4 | -1.21 | 1.03 | -0.412 | 20.5 | 18.84 | 248 | -- | -- |
| 71.71 | 0.394 | 8.92 | 0.238 | 1.31 | 1.46 | -1.2 | -- | -0.412 | 20.5 | 19.58 | 256 | -- | -- |
| 74.26 | 0.404 | 8.92 | 0.503 | 1.58 | 1.32 | -- | 1.3 | -0.392 | 20.7 | 21.09 | 167 | -- | -- |
| 74.51 | 0.402 | 8.94 | 0.274 | 1.37 | 1.39 | -- | -- | -0.446 | 20.7 | 21.68 | 160 | -- | -- |
| 135.71 | 0.543 | 8.95 | -0.123 | -- | 2.21 | -- | -1.2 | -0.581 | -- | 23.22 | 521 | -- | -- |
| 105.63 | 0.482 | 8.89 | 0.555 | 1.64 | -- | -0.804 | -- | -0.219 | 19.5 | -- | -- | -- | -- |
| 107.38 | 0.485 | 8.89 | 0.574 | 1.64 | -- | -- | -- | -0.22 | 19.4 | -- | -- | -- | -- |
| 136.88 | 0.545 | 8.91 | 0.142 | -- | 2.01 | -- | -- | -0.513 | -- | 23.25 | 507 | -- | -- |
| 76.34 | 0.407 | 8.95 | -- | 1.36 | 1.46 | -- | -- | -0.48 | 20.8 | 21.47 | 167 | -- | -- |
| 251.03 | 0.74 | 8.85 | 0.549 | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
| 116.08 | 0.504 | 8.91 | -- | 1.64 | -- | -- | -- | -0.283 | 19.5 | -- | -- | -- | -- |
| 137.36 | 0.546 | 8.92 | -- | -- | 2.03 | -- | -- | -0.536 | -- | 23.13 | 509 | -- | -- |
| 258.97 | 0.751 | 8.87 | -- | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.40 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 6 | 68.73 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 9 | 68.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 17 | 69.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 23 | 69.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 24 | 69.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 91 | 70.75 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 106 | 70.98 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 127 | 71.31 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 131 | 71.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 162 | 71.78 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 169 | 71.88 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 176 | 72.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 192 | 72.12 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 203 | 72.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 16 |
| 267 | 72.79 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 268 | 72.79 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 282 | 72.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 341 | 73.48 | temperature | 25 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 421 | 73.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 435 | 73.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 574 | 74.20 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 669 | 74.51 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 748 | 74.83 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 956 | 75.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 21 |