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Os05g0171300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Plastidial ADP-glucose transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.65 (0.0189) R2 : 0.487
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.648 (0.0518) R2dC : 0.199 R2C : -0.00829
β3 : -1.63 (0.0839) R2dE : 0.536 R2E : 0.277
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.133 (0.0422) R2dN8 : 0.0176 R2N8 : -0.0483
σ : 0.35
deviance : 56.4
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C
peak time of C : 6.14
E
wheather : temperature
threshold : 27.38
memory length : 181
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.43 0.34 9.66 -0.316 0.682 -1.69 0.937 0.392 -0.181 6.16 28.01 169 -- --
52.56 0.338 9.65 -0.265 0.681 -1.72 1.03 -- -0.175 6.18 27.71 178 -- --
54.29 0.343 9.67 -0.368 0.676 -1.69 -- 0.704 -0.2 5.99 27.78 174 -- --
54.96 0.345 9.65 -0.246 0.676 -1.72 -- -- -0.177 5.98 27.52 174 -- --
70.56 0.391 9.69 -0.416 -- -1.49 -- 0.618 -0.124 -- 32.33 1546 -- --
94.15 0.455 9.57 0.168 0.416 -- 0.887 -- 0.196 8.71 -- -- -- --
96.72 0.461 9.57 0.198 0.412 -- -- -- 0.197 8.92 -- -- -- --
70.84 0.392 9.64 -0.266 -- -1.44 -- -- -0.0687 -- 35.1 1526 -- --
56.4 0.35 9.65 -- 0.648 -1.63 -- -- -0.133 6.14 27.38 181 -- --
106.42 0.482 9.58 0.198 -- -- -- -- 0.199 -- -- -- -- --
97.75 0.462 9.58 -- 0.412 -- -- -- 0.175 8.88 -- -- -- --
72.45 0.396 9.63 -- -- -1.33 -- -- -0.022 -- 38.44 1525 -- --
107.45 0.484 9.59 -- -- -- -- -- 0.178 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.44 temperature 15 90 > th dose dependent rect. 7 23
10 50.48 temperature 15 10 > th dose dependent rect. 8 22
18 51.41 temperature 30 90 < th dose dependent rect. 5 23
32 52.83 temperature 30 90 < th dose dependent rect. 3 23
36 52.92 temperature 30 270 < th dose dependent rect. 13 22
38 53.04 temperature 30 270 < th dose dependent rect. 1 23
42 53.14 temperature 10 1440 > th dose dependent rect. 11 1
45 53.24 temperature 30 90 < th dose dependent rect. 15 23
46 53.25 temperature 10 1440 > th dose dependent rect. 9 3
48 53.27 temperature 10 1440 > th dose dependent rect. 9 5
49 53.27 temperature 30 90 < th dose dependent rect. 5 20
86 53.88 temperature 30 90 < th dose dependent no NA NA
134 54.46 temperature 10 90 > th dose dependent no NA NA
167 54.69 temperature 15 270 > th dose dependent rect. 17 23
176 54.76 temperature 30 1440 < th dose dependent rect. 8 4
199 54.92 temperature 30 270 < th dose dependent rect. 23 23
207 54.97 temperature 30 30 < th dose dependent rect. 23 23
222 55.05 temperature 10 1440 > th dose dependent sin 23 NA
243 55.13 temperature 30 90 < th dose dependent rect. 19 23
250 55.16 temperature 30 1440 < th dose dependent rect. 7 7
366 55.69 temperature 30 30 < th dose dependent rect. 21 23
472 56.08 temperature 30 1440 < th dose dependent rect. 7 13
482 56.12 temperature 30 1440 < th dose dependent rect. 7 16
683 56.65 temperature 30 1440 < th dose dependent sin 23 NA
923 57.15 temperature 10 4320 > th dose dependent rect. 16 7
924 57.16 temperature 10 1440 > th dose dependent no NA NA
927 57.16 temperature 30 4320 < th dose dependent rect. 20 3
955 57.21 temperature 10 4320 > th dose dependent rect. 20 3
972 57.24 temperature 10 1440 > th dose dependent rect. 13 23