Os05g0169600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine/threonine protein kinase domain containing protein.
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Os05g0169600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Serine/threonine protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.46 | 0.429 | 6.58 | 1.68 | 0.387 | -0.816 | -0.286 | -1.55 | 0.8 | 7.03 | 21.9 | 1533 | -- | -- |
| 90.27 | 0.442 | 6.63 | 1.33 | 0.516 | -0.763 | -0.229 | -- | 0.671 | 7.1 | 24.7 | 1897 | -- | -- |
| 83.4 | 0.425 | 6.58 | 1.63 | 0.388 | -0.847 | -- | -1.52 | 0.798 | 7.22 | 21.73 | 1445 | -- | -- |
| 90.22 | 0.442 | 6.64 | 1.3 | 0.459 | -0.769 | -- | -- | 0.655 | 6.94 | 24.6 | 1787 | -- | -- |
| 91.25 | 0.445 | 6.59 | 1.64 | -- | -0.858 | -- | -1.55 | 0.8 | -- | 21.8 | 1454 | -- | -- |
| 107.93 | 0.487 | 6.58 | 1.52 | 0.399 | -- | -0.283 | -- | 0.929 | 6.92 | -- | -- | -- | -- |
| 108.13 | 0.487 | 6.58 | 1.51 | 0.398 | -- | -- | -- | 0.93 | 7 | -- | -- | -- | -- |
| 96.8 | 0.458 | 6.64 | 1.29 | -- | -0.715 | -- | -- | 0.665 | -- | 24.4 | 1395 | -- | -- |
| 93.83 | 0.451 | 6.71 | -- | 0.399 | -1.29 | -- | -- | 0.341 | 7.3 | 21.01 | 47520 | -- | -- |
| 116.47 | 0.504 | 6.59 | 1.52 | -- | -- | -- | -- | 0.937 | -- | -- | -- | -- | -- |
| 168.38 | 0.607 | 6.61 | -- | 0.416 | -- | -- | -- | 0.761 | 6.77 | -- | -- | -- | -- |
| 102.23 | 0.471 | 6.72 | -- | -- | -1.29 | -- | -- | 0.345 | -- | 21.02 | 47352 | -- | -- |
| 177.42 | 0.622 | 6.62 | -- | -- | -- | -- | -- | 0.768 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 2 | 83.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 7 | 84.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 10 | 84.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 11 | 84.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 13 | 84.52 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 15 | 84.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 18 | 84.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 19 | 84.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 46 | 84.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 63 | 84.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 21 |
| 76 | 84.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 98 | 84.99 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 102 | 84.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 104 | 84.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 138 | 85.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 142 | 85.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 183 | 85.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 205 | 85.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 206 | 85.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 236 | 85.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 337 | 85.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 357 | 85.50 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 358 | 85.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 14 |
| 389 | 85.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 3 | NA |
| 492 | 85.68 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 530 | 85.73 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 663 | 85.86 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 710 | 85.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |