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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0169500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0186) R2 : 0.0499
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.191 (0.0391) R2dN8 : 0.0644 R2N8 : 0.0499
σ : 0.35
deviance : 56.23
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.96 0.345 2.86 0.0205 0.226 0.295 -0.145 -0.0691 0.168 2.85 11.41 227 -- --
53.97 0.342 2.86 0.0224 0.227 0.294 -0.086 -- 0.17 2.9 11.41 226 -- --
53.97 0.342 2.86 0.0425 0.234 0.3 -- 0.0652 0.174 2.82 10.17 229 -- --
53.97 0.342 2.86 0.0242 0.242 0.301 -- -- 0.173 2.83 10.16 229 -- --
54.94 0.345 2.85 0.0707 -- 0.123 -- 0.14 0.195 -- 11.44 188 -- --
55.55 0.349 2.85 0.0629 0.074 -- 0.232 -- 0.199 10.7 -- -- -- --
55.77 0.35 2.85 0.0723 0.0728 -- -- -- 0.2 10.7 -- -- -- --
54.88 0.345 2.85 0.0634 -- 0.134 -- -- 0.192 -- 14.37 151 -- --
53.98 0.342 2.86 -- 0.244 0.305 -- -- 0.172 2.82 10.17 229 -- --
56.1 0.35 2.85 0.0709 -- -- -- -- 0.199 -- -- -- -- --
55.91 0.35 2.85 -- 0.0723 -- -- -- 0.192 10.7 -- -- -- --
54.94 0.345 2.86 -- -- 0.129 -- -- 0.188 -- 11.47 145 -- --
56.23 0.35 2.86 -- -- -- -- -- 0.191 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.98 temperature 15.0 30 > th dose independent rect. 11 23
3 50.20 wind 1.0 10 > th dose dependent rect. 10 1
5 50.24 wind 3.0 30 > th dose independent rect. 10 1
6 50.49 atmosphere 1005.0 10 > th dose independent rect. 10 1
8 50.54 radiation 30.0 30 > th dose independent rect. 10 1
9 50.57 temperature 30.0 30 < th dose independent rect. 10 1
11 50.58 atmosphere 1010.0 30 < th dose independent rect. 10 1
12 50.58 atmosphere 1000.0 30 > th dose dependent rect. 10 1
14 50.59 humidity 70.0 30 < th dose dependent rect. 10 1
19 50.60 radiation 10.0 30 > th dose dependent rect. 10 1
21 50.61 temperature 20.0 30 > th dose independent rect. 10 1
22 50.61 radiation 10.0 30 > th dose independent rect. 10 1
24 50.61 humidity 50.0 30 > th dose dependent rect. 10 1
27 50.62 wind 1.0 30 < th dose independent rect. 10 1
28 50.62 temperature 10.0 30 > th dose independent rect. 10 1
30 50.62 temperature 10.0 1440 > th dose independent rect. 11 1
34 50.62 humidity 50.0 30 > th dose independent rect. 10 1
35 50.62 humidity 90.0 30 < th dose independent rect. 10 1
37 50.62 atmosphere 995.0 1440 > th dose independent rect. 11 1
43 50.62 precipitation 0.1 30 < th dose independent rect. 10 1
44 50.62 precipitation 0.1 1440 < th dose independent rect. 11 1
46 50.62 temperature 10.0 1440 > th dose independent rect. 12 23
49 50.62 wind 1.0 30 < th dose dependent rect. 10 1
50 50.62 temperature 10.0 30 > th dose dependent rect. 10 1
52 50.62 precipitation 0.1 30 < th dose dependent rect. 10 1
53 50.62 precipitation 0.1 1440 < th dose dependent rect. 11 1
58 50.64 humidity 70.0 30 < th dose independent rect. 10 1
65 50.67 wind 5.0 30 < th dose independent rect. 10 1
70 50.68 radiation 40.0 30 < th dose independent rect. 10 1
75 50.70 wind 9.0 30 < th dose dependent rect. 10 1
76 50.70 radiation 40.0 30 < th dose dependent rect. 10 1
80 50.72 atmosphere 1015.0 30 < th dose dependent rect. 10 1
102 50.78 precipitation 0.1 10 < th dose independent rect. 11 23
103 50.78 precipitation 0.1 10 < th dose dependent rect. 11 23
104 50.79 humidity 50.0 30 > th dose independent rect. 11 23
107 50.81 wind 9.0 30 < th dose independent rect. 11 23
108 50.84 radiation 1.0 1440 > th dose independent rect. 11 1
128 51.06 atmosphere 1000.0 30 > th dose independent rect. 11 23
140 52.09 temperature 30.0 30 < th dose dependent rect. 10 1
143 52.20 radiation 20.0 90 > th dose independent rect. 15 20
146 52.28 humidity 90.0 1440 < th dose independent rect. 11 1
156 52.54 atmosphere 1015.0 30 < th dose independent rect. 11 23
162 52.63 wind 1.0 270 < th dose dependent rect. 2 1
169 52.66 temperature 25.0 90 > th dose dependent rect. 23 12
170 52.69 radiation 10.0 720 < th dose independent rect. 17 6
175 52.73 precipitation 0.1 720 < th dose independent rect. 8 15
177 52.73 precipitation 0.1 720 < th dose dependent rect. 8 15
178 52.74 wind 1.0 720 > th dose independent rect. 9 14
184 52.76 radiation 1.0 90 > th dose dependent rect. 15 20
190 52.80 wind 1.0 720 > th dose independent rect. 11 10
192 52.81 wind 1.0 270 < th dose independent rect. 2 1
195 52.81 temperature 25.0 90 > th dose dependent rect. 2 9
203 52.86 temperature 30.0 30 < th dose independent rect. 11 23
204 52.87 precipitation 0.1 720 < th dose independent rect. 11 9
205 52.87 precipitation 0.1 720 < th dose dependent rect. 11 9
206 52.88 wind 1.0 720 > th dose independent rect. 17 6
208 52.89 temperature 15.0 720 > th dose independent rect. 17 6
217 52.95 humidity 70.0 30 < th dose independent rect. 16 19
219 52.96 humidity 50.0 90 > th dose independent rect. 11 12
222 53.00 temperature 15.0 90 > th dose independent rect. 11 12
231 53.08 humidity 50.0 720 > th dose independent rect. 17 6
244 53.14 precipitation 0.1 720 < th dose independent rect. 11 18
245 53.14 precipitation 0.1 720 < th dose dependent rect. 11 18
246 53.15 temperature 10.0 720 > th dose independent rect. 23 9
247 53.15 temperature 30.0 720 < th dose independent rect. 23 9
248 53.15 humidity 50.0 720 > th dose independent rect. 23 9
250 53.15 atmosphere 995.0 720 > th dose independent rect. 23 9
251 53.15 temperature 10.0 720 > th dose independent rect. 8 15
252 53.16 radiation 40.0 720 < th dose independent rect. 15 8
253 53.16 wind 9.0 720 < th dose independent rect. 23 9
258 53.19 temperature 15.0 720 > th dose independent rect. 11 10
259 53.19 temperature 25.0 10 > th dose independent rect. 18 13
262 53.20 atmosphere 1015.0 720 < th dose independent rect. 11 9
263 53.20 temperature 10.0 720 > th dose independent rect. 20 15
264 53.20 atmosphere 995.0 720 > th dose independent rect. 20 15
266 53.21 radiation 40.0 720 < th dose dependent rect. 17 6
267 53.22 humidity 50.0 720 > th dose independent rect. 20 15
285 53.25 humidity 80.0 10 < th dose dependent rect. 16 19
292 53.27 temperature 10.0 30 > th dose dependent rect. 11 23
294 53.28 wind 1.0 720 > th dose independent rect. 11 12
305 53.30 atmosphere 995.0 720 > th dose independent rect. 17 6
306 53.30 wind 1.0 720 > th dose independent rect. 15 8
314 53.31 temperature 10.0 720 > th dose independent rect. 23 18
319 53.32 temperature 25.0 30 > th dose dependent rect. 16 19
325 53.34 temperature 10.0 720 > th dose independent rect. 5 6
326 53.34 atmosphere 995.0 720 > th dose independent rect. 5 6
327 53.34 atmosphere 1015.0 720 < th dose independent rect. 5 6
328 53.34 temperature 10.0 720 > th dose independent rect. 11 18
332 53.35 wind 9.0 720 < th dose independent rect. 5 6
351 53.37 wind 9.0 720 < th dose independent rect. 17 6
355 53.39 humidity 50.0 720 > th dose independent rect. 5 6
359 53.40 temperature 30.0 90 < th dose independent rect. 23 12
362 53.41 wind 1.0 720 > th dose independent rect. 11 2
363 53.41 wind 9.0 90 < th dose independent rect. 23 12
365 53.41 temperature 10.0 90 > th dose independent rect. 23 12
366 53.41 atmosphere 995.0 90 > th dose independent rect. 23 12
370 53.42 precipitation 0.1 720 < th dose independent rect. 5 6
371 53.42 radiation 40.0 720 < th dose independent rect. 23 9
372 53.42 precipitation 0.1 720 < th dose dependent rect. 5 6
374 53.43 wind 9.0 720 < th dose independent rect. 20 15
378 53.44 atmosphere 1000.0 10 < th dose independent rect. 5 1
387 53.44 humidity 50.0 90 > th dose independent rect. 23 12
389 53.44 atmosphere 1000.0 10 < th dose dependent rect. 5 1
417 53.48 precipitation 0.1 720 < th dose independent rect. 17 6
418 53.48 precipitation 0.1 720 < th dose independent rect. 1 22
422 53.48 precipitation 0.1 720 < th dose dependent rect. 17 6
423 53.48 precipitation 0.1 720 < th dose dependent rect. 1 22
426 53.49 temperature 15.0 30 > th dose dependent rect. 18 11
432 53.51 precipitation 0.1 720 < th dose independent rect. 11 16
437 53.51 temperature 15.0 90 > th dose dependent rect. 18 13
438 53.51 precipitation 0.1 720 < th dose dependent rect. 11 16
456 53.53 humidity 90.0 1440 > th dose dependent rect. 2 14
458 53.54 precipitation 0.1 720 < th dose independent rect. 23 2
464 53.54 precipitation 0.1 90 < th dose independent rect. 23 12
470 53.54 precipitation 0.1 720 < th dose dependent rect. 23 2
472 53.54 precipitation 0.1 90 < th dose dependent rect. 23 12
483 53.55 precipitation 0.1 720 < th dose independent rect. 23 9
499 53.55 precipitation 0.1 720 < th dose dependent rect. 23 9
503 53.56 humidity 50.0 90 > th dose independent rect. 11 10
504 53.56 atmosphere 995.0 720 > th dose independent rect. 8 15
505 53.56 precipitation 0.1 720 < th dose independent rect. 20 15
510 53.56 precipitation 0.1 720 < th dose dependent rect. 20 15
511 53.57 wind 7.0 720 < th dose independent rect. 23 2
513 53.57 temperature 10.0 720 > th dose independent rect. 23 2
514 53.57 temperature 30.0 720 < th dose independent rect. 23 2
515 53.57 humidity 50.0 720 > th dose independent rect. 23 2
518 53.57 atmosphere 995.0 720 > th dose independent rect. 23 2
519 53.57 radiation 1.0 720 < th dose independent rect. 23 2
524 53.57 wind 1.0 90 > th dose independent rect. 11 12
530 53.57 temperature 10.0 720 > th dose independent rect. 1 22
531 53.57 radiation 1.0 720 < th dose dependent rect. 23 2
537 53.57 humidity 90.0 1440 > th dose dependent rect. 2 7
541 53.58 wind 9.0 90 < th dose independent rect. 11 12
542 53.58 atmosphere 1015.0 90 < th dose independent rect. 11 12
543 53.58 precipitation 0.1 90 < th dose independent rect. 11 12
551 53.58 precipitation 0.1 90 < th dose dependent rect. 11 12
559 53.60 atmosphere 995.0 720 > th dose independent rect. 11 9
578 53.62 atmosphere 1015.0 720 < th dose independent rect. 11 2
579 53.62 temperature 15.0 720 > th dose independent rect. 11 12
591 53.63 humidity 50.0 720 > th dose dependent rect. 23 2
603 53.65 atmosphere 1015.0 90 < th dose independent rect. 23 12
610 53.66 temperature 15.0 30 > th dose independent rect. 18 14
643 53.69 temperature 25.0 720 > th dose dependent rect. 18 5
650 53.70 humidity 50.0 720 > th dose independent rect. 11 2
660 53.71 atmosphere 995.0 90 > th dose independent rect. 11 12
663 53.71 humidity 90.0 1440 > th dose dependent sin 3 NA
674 53.72 wind 9.0 720 < th dose independent rect. 11 2
702 53.73 atmosphere 1000.0 30 > th dose independent rect. 8 10
731 53.75 radiation 10.0 270 > th dose independent sin 12 NA
732 53.75 temperature 15.0 1440 > th dose independent rect. 17 1
733 53.75 precipitation 0.1 720 < th dose independent rect. 15 8
743 53.75 precipitation 0.1 720 < th dose dependent rect. 15 8
750 53.76 temperature 25.0 270 > th dose independent rect. 7 1
754 53.76 temperature 25.0 720 > th dose dependent rect. 17 9
756 53.76 temperature 25.0 720 > th dose dependent rect. 17 13
758 53.76 wind 9.0 10 < th dose dependent rect. 11 23
793 53.79 wind 9.0 720 < th dose independent rect. 23 18
804 53.80 temperature 25.0 10 > th dose independent sin 12 NA
824 53.81 temperature 30.0 10 < th dose dependent rect. 16 10
827 53.81 atmosphere 995.0 90 > th dose dependent rect. 23 12
833 53.82 temperature 10.0 30 > th dose dependent rect. 8 10
834 53.82 temperature 10.0 90 > th dose dependent rect. 23 12
854 53.84 humidity 90.0 1440 > th dose independent rect. 2 6
856 53.84 atmosphere 995.0 720 > th dose independent rect. 11 18
859 53.84 wind 9.0 720 < th dose dependent rect. 2 3
884 53.85 temperature 15.0 720 > th dose independent rect. 15 8
886 53.85 radiation 10.0 270 > th dose independent rect. 17 15
909 53.87 humidity 90.0 1440 > th dose independent rect. 2 12
912 53.87 humidity 90.0 90 < th dose dependent rect. 24 11
928 53.89 temperature 25.0 30 < th dose independent sin 12 NA
949 53.90 temperature 25.0 30 < th dose independent rect. 16 10
965 53.91 humidity 50.0 720 > th dose independent rect. 17 20
972 53.91 temperature 10.0 720 > th dose dependent rect. 17 6
980 53.92 radiation 10.0 270 > th dose independent rect. 7 1
983 53.92 temperature 15.0 1440 > th dose independent rect. 5 10