Os05g0169400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1421 family protein.
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Os05g0169400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1421 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.35 | 0.222 | 11.4 | 1.9 | 0.173 | -0.581 | -0.387 | 2.52 | 0.496 | 23.7 | 25.16 | 1758 | -- | -- |
| 24.32 | 0.23 | 11.4 | 1.3 | 0.174 | -0.282 | -0.359 | -- | 0.401 | 23.3 | 25.85 | 7649 | -- | -- |
| 22.92 | 0.223 | 11.4 | 1.93 | 0.173 | -0.599 | -- | 2.65 | 0.482 | 0.363 | 25.68 | 1736 | -- | -- |
| 24.34 | 0.23 | 11.4 | 1.31 | 0.184 | -0.304 | -- | -- | 0.397 | 1.36 | 25.7 | 7579 | -- | -- |
| 24.79 | 0.232 | 11.4 | 1.95 | -- | -0.592 | -- | 2.73 | 0.484 | -- | 25.82 | 1692 | -- | -- |
| 27.71 | 0.247 | 11.4 | 1.18 | 0.176 | -- | -0.33 | -- | 0.304 | 1.02 | -- | -- | -- | -- |
| 28.12 | 0.248 | 11.4 | 1.19 | 0.18 | -- | -- | -- | 0.306 | 1.62 | -- | -- | -- | -- |
| 26.42 | 0.239 | 11.4 | 1.31 | -- | -0.303 | -- | -- | 0.395 | -- | 26.1 | 7539 | -- | -- |
| 44.23 | 0.31 | 11.5 | -- | 0.0592 | 0.817 | -- | -- | -0.0129 | 21.5 | 8.977 | 47520 | -- | -- |
| 30.11 | 0.256 | 11.4 | 1.2 | -- | -- | -- | -- | 0.31 | -- | -- | -- | -- | -- |
| 65.75 | 0.379 | 11.5 | -- | 0.202 | -- | -- | -- | 0.173 | 1.81 | -- | -- | -- | -- |
| 34.74 | 0.275 | 11.5 | -- | -- | 0.769 | -- | -- | 0.239 | -- | 35.08 | 47520 | -- | -- |
| 68.23 | 0.386 | 11.5 | -- | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.46 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 21.46 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 7 | 21.54 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 13 | 21.58 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 39 | 21.76 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 71 | 21.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 73 | 21.86 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 95 | 21.91 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 103 | 21.93 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 114 | 21.95 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 123 | 21.97 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 130 | 21.99 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 156 | 22.02 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 173 | 22.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 184 | 22.06 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 185 | 22.06 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 245 | 22.15 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 295 | 22.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 297 | 22.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 8 |
| 306 | 22.25 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 10 |
| 312 | 22.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 317 | 22.27 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 318 | 22.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 322 | 22.27 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 329 | 22.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 335 | 22.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 347 | 22.32 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 361 | 22.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 376 | 22.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 444 | 22.43 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 454 | 22.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 462 | 22.44 | wind | 1.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 463 | 22.44 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 482 | 22.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 495 | 22.47 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 497 | 22.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 498 | 22.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 9 |
| 499 | 22.47 | wind | 9.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 501 | 22.47 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 508 | 22.48 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 509 | 22.48 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 525 | 22.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 531 | 22.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 541 | 22.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 543 | 22.50 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 573 | 22.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 591 | 22.53 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 604 | 22.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 8 |
| 612 | 22.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 639 | 22.55 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 643 | 22.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 11 |
| 648 | 22.56 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 17 | NA |
| 656 | 22.56 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 15 | NA |
| 657 | 22.56 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 17 | NA |
| 658 | 22.56 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 669 | 22.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 674 | 22.57 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 17 | NA |
| 695 | 22.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 14 |
| 780 | 22.61 | wind | 3.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 781 | 22.61 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 802 | 22.62 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 897 | 22.65 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 899 | 22.65 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 904 | 22.65 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 911 | 22.65 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 916 | 22.65 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 974 | 22.67 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 983 | 22.67 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 12 |