Os05g0167600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0167600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.82 | 0.647 | 6.88 | 1.6 | 2.19 | 0.21 | 1.62 | -1.99 | -0.421 | 7.32 | 4.698 | 10 | -- | -- |
| 196.84 | 0.653 | 6.85 | 1.55 | 2.15 | 0.529 | 1.4 | -- | -0.386 | 7.39 | 4.9 | 62 | -- | -- |
| 196.63 | 0.653 | 6.88 | 1.63 | 2.21 | 0.192 | -- | -1.69 | -0.419 | 7.26 | 4.688 | 9 | -- | -- |
| 201.66 | 0.661 | 6.85 | 1.55 | 2.13 | 0.514 | -- | -- | -0.395 | 7.35 | 4.8 | 62 | -- | -- |
| 344.32 | 0.864 | 6.92 | 1.05 | -- | 1.65 | -- | -1.64 | -0.34 | -- | 2.7 | 363 | -- | -- |
| 204.25 | 0.67 | 6.84 | 1.65 | 2.29 | -- | 1.11 | -- | -0.385 | 7.1 | -- | -- | -- | -- |
| 207.41 | 0.674 | 6.84 | 1.67 | 2.29 | -- | -- | -- | -0.388 | 7.04 | -- | -- | -- | -- |
| 346.15 | 0.867 | 6.88 | 1.19 | -- | 1.61 | -- | -- | -0.289 | -- | 2.97 | 352 | -- | -- |
| 261.08 | 0.753 | 6.88 | -- | 2.09 | 0.805 | -- | -- | -0.55 | 7.41 | 4.8 | 100 | -- | -- |
| 483.58 | 1.03 | 6.89 | 1.71 | -- | -- | -- | -- | -0.346 | -- | -- | -- | -- | -- |
| 280.68 | 0.784 | 6.88 | -- | 2.31 | -- | -- | -- | -0.574 | 6.99 | -- | -- | -- | -- |
| 381.39 | 0.91 | 6.9 | -- | -- | 1.8 | -- | -- | -0.394 | -- | 2.807 | 348 | -- | -- |
| 560.96 | 1.11 | 6.93 | -- | -- | -- | -- | -- | -0.536 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.90 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 5 | 177.52 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 7 | 178.06 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 12 | 17 |
| 8 | 178.12 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 10 | 178.75 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 11 | 178.78 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 14 | 179.03 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 17 | 179.62 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 3 |
| 21 | 179.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 25 | 179.90 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 28 | 179.90 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 29 | 179.92 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 31 | 180.03 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 35 | 180.59 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 38 | 180.71 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 42 | 180.87 | wind | 5.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 45 | 180.92 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 46 | 180.93 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 47 | 180.93 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 17 |
| 53 | 181.03 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 59 | 181.20 | temperature | 25.0 | 90 | > th | dose independent | rect. | 18 | 13 |
| 61 | 181.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 65 | 181.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 75 | 181.49 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 87 | 181.62 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 90 | 181.65 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 13 | 23 |
| 92 | 181.66 | wind | 5.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 98 | 181.73 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 99 | 181.76 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 12 | 14 |
| 105 | 181.84 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 18 | 18 |
| 106 | 181.84 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 109 | 181.85 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 110 | 181.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 112 | 181.94 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 118 | 181.99 | humidity | 90.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 123 | 182.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 145 | 182.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 147 | 182.22 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 150 | 182.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 6 |
| 151 | 182.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 153 | 182.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 156 | 182.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 158 | 182.27 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 163 | 182.32 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 165 | 182.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 174 | 182.37 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 3 |
| 176 | 182.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 181 | 182.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 200 | 182.51 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 208 | 182.55 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 211 | 182.55 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 218 | 182.59 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 12 | 3 |
| 227 | 182.64 | humidity | 50.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 235 | 182.68 | wind | 3.0 | 10 | > th | dose dependent | rect. | 12 | 22 |
| 257 | 182.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 260 | 182.79 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 273 | 182.87 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 15 | 21 |
| 304 | 183.01 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 310 | 183.04 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 15 | 21 |
| 330 | 183.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 345 | 183.18 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 351 | 183.21 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 354 | 183.23 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 364 | 183.27 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 369 | 183.30 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 390 | 183.36 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 394 | 183.37 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 395 | 183.37 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 397 | 183.38 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 410 | 183.42 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 416 | 183.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 422 | 183.45 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 423 | 183.45 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 431 | 183.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 452 | 183.51 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 471 | 183.54 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 476 | 183.55 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 553 | 183.65 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 558 | 183.65 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 633 | 183.73 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 794 | 183.85 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 817 | 183.87 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 818 | 183.87 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 3 |
| 820 | 183.87 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 859 | 183.89 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 871 | 183.90 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 968 | 183.95 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 996 | 183.96 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 3 | NA |