Os05g0166600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os05g0166600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.11 | 0.583 | 3.05 | -0.0559 | 0.179 | -0.549 | -0.217 | 1.27 | -0.0232 | 8.52 | 10.82 | 1390 | -- | -- |
| 157.75 | 0.585 | 3.05 | -0.0647 | 0.159 | -0.579 | -0.269 | -- | -0.013 | 8.39 | 10.59 | 1383 | -- | -- |
| 154.26 | 0.578 | 3.05 | -0.0593 | 0.179 | -0.547 | -- | 1.3 | -0.0225 | 8.55 | 10.82 | 1390 | -- | -- |
| 157.17 | 0.584 | 3.08 | -0.234 | 0.142 | -0.551 | -- | -- | -0.0735 | 7.92 | 11.1 | 1390 | -- | -- |
| 154.81 | 0.579 | 3.05 | -0.0618 | -- | -0.603 | -- | 1.39 | -0.0157 | -- | 10.83 | 1298 | -- | -- |
| 164.68 | 0.602 | 3.11 | -0.406 | 0.212 | -- | -0.23 | -- | -0.251 | 9.16 | -- | -- | -- | -- |
| 164.86 | 0.601 | 3.11 | -0.414 | 0.213 | -- | -- | -- | -0.251 | 9.23 | -- | -- | -- | -- |
| 157.3 | 0.584 | 3.08 | -0.252 | -- | -0.584 | -- | -- | -0.0889 | -- | 10.57 | 1290 | -- | -- |
| 158.54 | 0.586 | 3.07 | -- | 0.162 | -0.571 | -- | -- | -0.0611 | 7.87 | 10.48 | 1378 | -- | -- |
| 167.5 | 0.605 | 3.12 | -0.415 | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
| 169.38 | 0.609 | 3.1 | -- | 0.213 | -- | -- | -- | -0.205 | 9.38 | -- | -- | -- | -- |
| 158.84 | 0.587 | 3.07 | -- | -- | -0.657 | -- | -- | -0.0513 | -- | 10.49 | 1292 | -- | -- |
| 172.04 | 0.612 | 3.11 | -- | -- | -- | -- | -- | -0.204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 146.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 147.91 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 4 | 148.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 5 | 148.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 6 | 148.94 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 7 | 148.94 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 17 | 149.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 18 | 149.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 19 | 149.43 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 23 | 149.47 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 24 | 149.49 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 72 | 151.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 77 | 151.74 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 79 | 151.78 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 92 | 151.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 94 | 151.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 100 | 152.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 101 | 152.06 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 104 | 152.39 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 106 | 152.39 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 108 | 152.39 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 159 | 152.39 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 163 | 152.39 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 228 | 153.10 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 233 | 153.16 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 240 | 153.38 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 241 | 153.42 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 243 | 153.44 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 244 | 153.47 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 246 | 153.54 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 249 | 153.62 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 251 | 153.67 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 266 | 153.96 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 289 | 154.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 296 | 154.12 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 319 | 154.20 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 331 | 154.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 332 | 154.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 334 | 154.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 348 | 154.41 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 351 | 154.42 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 354 | 154.43 | radiation | 10.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 381 | 154.56 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 401 | 154.65 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 433 | 154.70 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 471 | 154.80 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 477 | 154.82 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 557 | 154.82 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 597 | 154.86 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 599 | 154.86 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 606 | 154.87 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 615 | 154.89 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 617 | 154.90 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 628 | 154.92 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 629 | 154.92 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 637 | 154.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 656 | 154.95 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 657 | 154.96 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 667 | 154.96 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 739 | 155.11 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 753 | 155.16 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 766 | 155.16 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 772 | 155.17 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 773 | 155.17 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 781 | 155.18 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 784 | 155.20 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 893 | 155.44 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 921 | 155.46 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 923 | 155.46 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 933 | 155.48 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 936 | 155.48 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 977 | 155.54 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 990 | 155.55 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 21 | 6 |