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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0166300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.01 (0.07) R2 : 0.46
β1 : -4.21 (0.29) R2dD : 0.366 R2D : -0.013
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.04 (0.195) R2dE : 0.311 R2E : 0.132
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -5 (0.792) R2dD*E : 0.0721 R2D*E : -0.073
γ1 : -1.19 (0.153) R2dN8 : 0.116 R2N8 : -0.0787
σ : 1.25
deviance : 718.36
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 20.5
memory length : 833
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 7.11
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
709.79 1.25 4.96 -4.02 0.6 3.33 1.84 -4.04 -1.13 14.5 20.2 758 7.09 --
740.3 1.27 4.9 -3.5 0.977 3.67 3.25 -- -0.99 14.8 20.22 774 7.52 --
716.23 1.25 4.97 -4.12 0.305 3.13 -- -4.84 -1.15 14.4 20.4 801 7.12 --
781.39 1.3 4.88 -3.35 0.0607 3.13 -- -- -1 2.59 20.69 897 7.1 --
718.36 1.25 5.01 -4.21 -- 3.04 -- -5 -1.19 -- 20.5 833 7.11 --
983.8 1.47 4.72 -2.47 1.76 -- -3.78 -- -0.393 4.94 -- -- -- --
1017.14 1.49 4.7 -2.45 1.76 -- -- -- -0.373 5.45 -- -- -- --
781.38 1.3 4.88 -3.35 -- 3.16 -- -- -1 -- 20.7 894 7.2 --
1045.52 1.51 4.76 -- 0.233 2.41 -- -- -0.49 1.09 20.66 750 5.65 --
1178.62 1.6 4.72 -2.39 -- -- -- -- -0.33 -- -- -- -- --
1175.65 1.6 4.64 -- 1.72 -- -- -- -0.1 5.51 -- -- -- --
1046.35 1.51 4.76 -- -- 2.48 -- -- -0.496 -- 20.61 737 6.02 --
1329.74 1.7 4.66 -- -- -- -- -- -0.0644 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 706.80 temperature 20 720 > th dose independent rect. 16 15
6 713.33 temperature 20 720 > th dose independent sin 13 NA
22 724.48 temperature 20 720 < th dose independent rect. 16 15
24 725.02 temperature 20 720 < th dose independent sin 12 NA
48 728.68 temperature 20 720 > th dose independent rect. 18 21
49 728.78 temperature 20 720 < th dose independent rect. 19 10
243 751.39 temperature 20 720 > th dose independent no NA NA
269 753.85 temperature 20 720 < th dose independent no NA NA
280 754.76 temperature 20 720 > th dose independent rect. 1 23
287 755.76 temperature 20 720 > th dose independent rect. 3 23
316 759.01 temperature 20 720 < th dose independent rect. 3 23
324 759.99 temperature 20 720 < th dose independent rect. 1 23
343 762.92 temperature 20 720 < th dose independent rect. 23 2
409 772.78 wind 9 4320 > th dose independent rect. 17 5
410 773.18 wind 9 4320 < th dose independent rect. 17 4
427 775.84 wind 7 4320 > th dose dependent rect. 18 3
449 778.30 wind 9 4320 > th dose independent rect. 17 11
450 778.34 wind 7 4320 < th dose independent rect. 18 2
454 778.52 wind 7 4320 > th dose dependent rect. 17 5
466 779.95 wind 7 4320 > th dose independent rect. 18 1
550 787.56 wind 9 4320 < th dose independent rect. 17 11
553 787.61 wind 9 4320 < th dose independent rect. 17 9
559 787.88 wind 7 4320 > th dose dependent rect. 17 8
609 789.78 temperature 25 720 < th dose dependent rect. 16 18
686 792.44 wind 3 4320 > th dose dependent rect. 24 1
693 792.57 temperature 25 720 < th dose dependent sin 11 NA
770 793.82 wind 9 4320 < th dose independent rect. 17 16